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HECW1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:2.6 nTPM
HPA:2.6 nTPM
GTEx:1.5 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:17.2 nTPM
Mouse:27.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007593Antibody HPA007609
Glial cells MediumHigh
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2.6
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
2860 Male, age 74, right hemisphere 0.0
Dentate gyrus
nTPM: 0.0
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.0
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.8
2343 Female, age 94, left hemisphere 5.1
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2342 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.0
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 0.2
2622 Female, age 67, right hemisphere 1.5
2693 Female, age 94, both hemispheres 0.5
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2245 Female, age 91, both hemispheres 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
2718 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 1.1
1794 Male, age 80, right hemisphere 3.9
1841 Female, age 85, right hemisphere 2.9
1847 Female, age 91, left hemisphere 0.0
2519 Male, age 75, right hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 2.6
2702 Female, age 67, right hemisphere 18.4
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1.5
Samples: 197

Max nTPM: 11.0
Min nTPM: 0.2
Std nTPM: 1.6
Median nTPM: 0.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 11.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 10.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 9.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 7.5
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 6.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 6.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 6.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 5.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 5.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 4.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 4.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10153-102I9 76 years, female 16.5
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 5.6
Min nTPM: 4.6
Sample A Female 4.8
Sample B Female 5.1
Sample C Male 5.6
Sample D Male 4.6
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 18.1
Min nTPM: 16.0
Sample A Female 18.1
Sample B Female 17.7
Sample C Male 16.0
Sample D Male 16.9
Subiculum
nTPM: 11.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 8.9
Sample A Female 16.0
Sample B Female 10.5
Sample C Male 9.8
Sample D Male 8.9
Ventral hippocampus
nTPM: 5.8
Samples: 4

Max nTPM: 7.5
Min nTPM: 4.4
Sample A Female 4.4
Sample B Female 5.9
Sample C Male 7.5
Sample D Male 5.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 31.4
Min nTPM: 19.4
Sample A Male 27.6
Sample B Male 29.9
Sample C Female 19.4
Sample D Female 31.4
Hippocampal formation
nTPM: 12.9
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.0
Sample A Male 12.9
Sample B Male 12.8
Sample C Female 11.0
Sample D Female 14.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
74882685 Antisense, RP_060315_04_G01, Mouse strain C57BL/6J (56 days, male) 1.0
69782168 Antisense, RP_050505_02_D11, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.