CFLAR

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:37.8 FPKM
GTEx:11.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA019044

 

Antibody CAB022157

 

Antibody CAB025216

 

Endothelial cells

Low   Medium   Medium  

Glandular cells

High   High   Medium  

Peripheral nerve/ganglion

Low   Medium   Not available  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

37.8

overview Male, age 54
Sample 1
FPKM: 32.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 46.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 33.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 30.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 53.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 31.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 36.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

11.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 13.2
Samples: 149

Max RPKM: 25.7
Min RPKM: 4
Std RPKM: 4.3
Median RPKM: 12.4
GTEX-14E6C-2226-SM-5QGQG 25.7
GTEX-ZYY3-2226-SM-5E45A 24.9
GTEX-12KS4-2326-SM-5EGJB 23.5
GTEX-14C39-1626-SM-5S2P4 22.8
GTEX-11ZU8-1126-SM-5EQ5K 22.5
GTEX-13OVJ-1826-SM-5KM2D 22.4
GTEX-12WSL-1826-SM-5LZW9 22.1
GTEX-148VJ-2426-SM-5NQ9Y 21.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.5
Samples: 196

Max RPKM: 21.4
Min RPKM: 3.4
Std RPKM: 3.3
Median RPKM: 8.5
GTEX-13O3P-2326-SM-5KM55 21.4
GTEX-14C38-2626-SM-5RQI4 19.0
GTEX-145MO-2426-SM-5NQ9W 18.1
GTEX-11TUW-2026-SM-5EQL8 18.1
GTEX-ZYFC-2626-SM-5NQ6S 17.4
GTEX-ZYVF-2826-SM-5GIDK 17.3
GTEX-U3ZH-1326-SM-4DXSF 17.2
GTEX-ZAB4-2226-SM-5HL97 16.7
Show all