HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:39.4 nTPM
HPA:39.4 nTPM
GTEx:21.0 nTPM
FANTOM5:80.1 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:7.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019044Antibody CAB022157Antibody CAB025216
Glial cells Not detectedMediumMedium
Neuronal cells MediumHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.4
Sample id Sample description nTPM
Hippocampus
nTPM: 39.4
1855 Male, age 76, left hemisphere 47.9
2148 Female, age 91, left hemisphere 42.0
1898 Male, age 80, left hemisphere 40.4
2621 Female, age 67, right hemisphere 37.4
2529 Female, age 94, left hemisphere 36.1
1911 Female, age 85, right hemisphere 32.6
Dentate gyrus
nTPM: 39.3
2531 Female, age 67, both hemispheres 46.7
2010 Male, age 76, both hemispheres 44.9
2530 Female, age 94, left hemisphere 38.4
2246 Female, age 85, both hemispheres 37.9
1927 Female, age 91, both hemispheres 35.3
2528 Male, age 74, both hemispheres 32.5
Entorhinal gyrus
nTPM: 28.9
2686 Male, age 75, right hemisphere 36.8
2117 Female, age 91, right hemisphere 31.3
2764 Male, age 80, right hemisphere 28.9
1787 Male, age 76, left hemisphere 27.5
2613 Female, age 94, left hemisphere 25.0
1938 Female, age 85, left hemisphere 23.8
Hippocampus, CA1
nTPM: 36.6
1873 Female, age 85, both hemispheres 43.9
2082 Female, age 91, right hemisphere 40.4
2045 Male, age 76, both hemispheres 39.3
2527 Male, age 74, both hemispheres 29.7
2749 Male, age 80, left hemisphere 29.6
Hippocampus, CA2
nTPM: 34.9
1963 Male, age 80, left hemisphere 43.5
2113 Female, age 91, right hemisphere 37.3
2437 Female, age 94, left hemisphere 36.8
1892 Male, age 76, both hemispheres 33.3
1940 Female, age 85, left hemisphere 30.6
2249 Male, age 74, both hemispheres 28.0
Hippocampus, CA3
nTPM: 38.8
2861 Female, age 67, both hemispheres 53.8
2436 Male, age 74, both hemispheres 39.4
1867 Male, age 76, both hemispheres 38.1
1891 Female, age 85, both hemispheres 36.0
2137 Male, age 80, left hemisphere 33.5
2620 Female, age 94, left hemisphere 32.2
Parahippocampal cortex
nTPM: 29.5
2018 Male, age 76, both hemispheres 38.3
2622 Female, age 67, right hemisphere 34.4
2693 Female, age 94, both hemispheres 31.2
2692 Male, age 74, both hemispheres 31.1
1933 Female, age 85, both hemispheres 28.4
1850 Male, age 80, both hemispheres 28.0
2532 Female, age 72, left hemisphere 27.5
2250 Female, age 67, right hemisphere 26.7
1990 Female, age 91, right hemisphere 25.6
2245 Female, age 91, both hemispheres 24.1
Perirhinal gyrus
nTPM: 25.1
2848 Male, age 76, right hemisphere 29.3
2521 Female, age 94, right hemisphere 28.1
1841 Female, age 85, right hemisphere 23.8
1794 Male, age 80, right hemisphere 22.2
1847 Female, age 91, left hemisphere 22.2
Subiculum
nTPM: 34.0
2042 Male, age 76, both hemispheres 43.3
2729 Female, age 91, right hemisphere 40.6
1901 Male, age 80, both hemispheres 31.0
2438 Female, age 94, left hemisphere 30.8
2619 Male, age 74, both hemispheres 30.1
1977 Female, age 85, both hemispheres 27.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.0
Samples: 197

Max nTPM: 111.6
Min nTPM: 5.4
Std nTPM: 10.7
Median nTPM: 18.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 111.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 66.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 51.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 48.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 44.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 42.3
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 41.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 41.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 40.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 38.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 37.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.1
FF:10169-103B7 60 years, female 95.2
FF:10153-102I9 76 years, female 65.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 13.8
Min nTPM: 13.2
Sample A Female 13.2
Sample B Female 13.2
Sample C Male 13.2
Sample D Male 13.8
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 12.0
Sample A Female 13.0
Sample B Female 12.7
Sample C Male 12.0
Sample D Male 12.5
Subiculum
nTPM: 13.0
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 13.9
Sample C Male 11.8
Sample D Male 14.5
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 15.1
Min nTPM: 12.6
Sample A Female 14.6
Sample B Female 15.1
Sample C Male 12.6
Sample D Male 13.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 7.7
Min nTPM: 7.0
Sample A Male 7.5
Sample B Male 7.0
Sample C Female 7.4
Sample D Female 7.7
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 7.0
Sample A Male 7.0
Sample B Male 7.4
Sample C Female 8.1
Sample D Female 7.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68545348 Antisense, RP_050118_03_C07, Mouse strain C57BL/6J (56 days, male) 1.0
71212494 Antisense, RP_050816_03_D03, Mouse strain C57BL/6J (56 days, male) 0.0

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