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RBM5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:43.6 nTPM
HPA:43.6 nTPM
GTEx:48.2 nTPM
FANTOM5:128.6 Scaled Tags Per Million
Pig:42.8 nTPM
Mouse:38.9 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017335Antibody HPA018011
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.6
Sample id Sample description nTPM
Hippocampus
nTPM: 40.8
2529 Female, age 94, left hemisphere 43.7
2621 Female, age 67, right hemisphere 43.6
1911 Female, age 85, right hemisphere 43.3
2148 Female, age 91, left hemisphere 42.3
2860 Male, age 74, right hemisphere 38.9
1898 Male, age 80, left hemisphere 37.6
1855 Male, age 76, left hemisphere 36.1
Dentate gyrus
nTPM: 41.6
2531 Female, age 67, both hemispheres 44.0
2246 Female, age 85, both hemispheres 43.6
2010 Male, age 76, both hemispheres 42.0
2528 Male, age 74, both hemispheres 41.9
1927 Female, age 91, both hemispheres 40.7
2530 Female, age 94, left hemisphere 37.2
Entorhinal gyrus
nTPM: 42.3
1787 Male, age 76, left hemisphere 43.8
2117 Female, age 91, right hemisphere 42.9
2764 Male, age 80, right hemisphere 42.5
2613 Female, age 94, left hemisphere 42.4
2686 Male, age 75, right hemisphere 41.3
1938 Female, age 85, left hemisphere 41.0
Hippocampus, CA1
nTPM: 40.6
2045 Male, age 76, both hemispheres 42.3
2527 Male, age 74, both hemispheres 41.9
2082 Female, age 91, right hemisphere 41.5
2343 Female, age 94, left hemisphere 40.2
1873 Female, age 85, both hemispheres 39.0
2749 Male, age 80, left hemisphere 38.7
Hippocampus, CA2
nTPM: 40.1
1940 Female, age 85, left hemisphere 41.3
2113 Female, age 91, right hemisphere 41.0
1892 Male, age 76, both hemispheres 40.9
2437 Female, age 94, left hemisphere 40.7
1963 Male, age 80, left hemisphere 40.3
2342 Male, age 74, both hemispheres 36.3
Hippocampus, CA3
nTPM: 41.0
1891 Female, age 85, both hemispheres 44.4
2137 Male, age 80, left hemisphere 41.9
1867 Male, age 76, both hemispheres 40.7
2861 Female, age 67, both hemispheres 40.5
2436 Male, age 74, both hemispheres 39.7
2620 Female, age 94, left hemisphere 38.7
Parahippocampal cortex
nTPM: 43.6
2693 Female, age 94, both hemispheres 46.5
2018 Male, age 76, both hemispheres 46.3
2718 Female, age 67, right hemisphere 45.6
2692 Male, age 74, both hemispheres 44.6
2532 Female, age 72, left hemisphere 43.1
1990 Female, age 91, right hemisphere 42.6
1850 Male, age 80, both hemispheres 42.4
2245 Female, age 91, both hemispheres 42.4
1933 Female, age 85, both hemispheres 41.5
2622 Female, age 67, right hemisphere 41.1
Perirhinal gyrus
nTPM: 41.8
2519 Male, age 75, right hemisphere 44.7
1794 Male, age 80, right hemisphere 42.7
1841 Female, age 85, right hemisphere 42.5
2521 Female, age 94, right hemisphere 42.2
2848 Male, age 76, right hemisphere 40.9
1847 Female, age 91, left hemisphere 37.8
Subiculum
nTPM: 41.3
2042 Male, age 76, both hemispheres 45.3
1901 Male, age 80, both hemispheres 43.0
1977 Female, age 85, both hemispheres 42.1
2702 Female, age 67, right hemisphere 40.3
2729 Female, age 91, right hemisphere 39.7
2619 Male, age 74, both hemispheres 39.6
2438 Female, age 94, left hemisphere 38.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.2
Samples: 197

Max nTPM: 93.8
Min nTPM: 13.8
Std nTPM: 10.4
Median nTPM: 47.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 93.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 82.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 79.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 78.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 69.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 69.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 69.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 68.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 67.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 66.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 66.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.6
FF:10169-103B7 60 years, female 139.1
FF:10153-102I9 76 years, female 118.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 46.6
Min nTPM: 39.8
Sample A Female 39.8
Sample B Female 39.8
Sample C Male 45.0
Sample D Male 46.6
Entorhinal cortex
nTPM: 38.0
Samples: 4

Max nTPM: 41.0
Min nTPM: 35.3
Sample A Female 41.0
Sample B Female 36.3
Sample C Male 35.3
Sample D Male 39.2
Subiculum
nTPM: 42.3
Samples: 4

Max nTPM: 44.1
Min nTPM: 40.0
Sample A Female 40.0
Sample B Female 42.2
Sample C Male 42.7
Sample D Male 44.1
Ventral hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 45.9
Min nTPM: 39.4
Sample A Female 39.4
Sample B Female 41.8
Sample C Male 42.3
Sample D Male 45.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 42.5
Min nTPM: 35.3
Sample A Male 39.4
Sample B Male 42.5
Sample C Female 38.5
Sample D Female 35.3
Hippocampal formation
nTPM: 37.0
Samples: 4

Max nTPM: 41.8
Min nTPM: 33.5
Sample A Male 36.5
Sample B Male 41.8
Sample C Female 33.5
Sample D Female 36.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
69818030 Antisense, RP_050510_04_C06, Mouse strain C57BL/6J (56 days, male) 12.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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