COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Low
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.9 nTPM
HPA:14.9 nTPM
GTEx:13.9 nTPM
FANTOM5:28.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody CAB009743
Endothelial cells Medium
Glandular cells Not detected
Peripheral nerve/ganglion Low



COLON - HPA RNA-seqi
Average nTPM 14.9
overview
Male, age 54 		Colon sample 67
nTPM: 12.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 15.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 13.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 12.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 20.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 18.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 14.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 12.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 17.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 13.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 16.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 15.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 10.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 13.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 13.9
Samples: 373

Max nTPM: 28.1
Min nTPM: 4.3
Std nTPM: 3.7
Median nTPM: 13.6
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 28.1
GTEX-1KXAM-1926-SM-D3LAG 60-69 years, male 25.4
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 25.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 25.0
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 23.8
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 23.2
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 22.2
GTEX-1AX9K-1626-SM-73KUS 50-59 years, male 21.9
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 21.9
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 21.8
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 21.7
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Colon - Transverse
Average nTPM: 10.5
Samples: 406

Max nTPM: 26.8
Min nTPM: 3.2
Std nTPM: 4.1
Median nTPM: 9.6
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 26.8
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 23.3
GTEX-117YX-0826-SM-5H11J 50-59 years, male 22.1
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 22.1
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 21.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 21.6
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 21.2
GTEX-1J1OQ-2726-SM-AHZ3R 40-49 years, female 21.2
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 20.5
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 20.1
GTEX-1N2EF-1926-SM-DTX8M 60-69 years, male 19.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 28.7
FF:10014-101C5 62,83,84 years, mixed 28.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.