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ARHGAP33
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:19.6 nTPM
HPA Brain:22.8 nTPM
GTEx:19.6 nTPM
FANTOM5:30.0 Scaled Tags Per Million
Pig:8.1 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 19.9
2816 Male, age 47, midline 25.6
2565 Male, age 75, midline 21.8
2194 Female, age 79, both hemispheres 21.4
1981 Female, age 72, midline 15.8
2048 Male, age 55, midline 15.1
Cervical spinal cord, dorsal horn
nTPM: 22.8
2296 Male, age 66, both hemispheres 30.4
2721 Male, age 90, both hemispheres 26.1
1877 Male, age 55, unknown 24.5
2297 Male, age 75, both hemispheres 23.9
2069 Male, age 47, both hemispheres 16.8
2173 Female, age 72, unknown 15.3
Cervical spinal cord, ventral horn
nTPM: 20.1
2820 Female, age 79, both hemispheres 26.9
2068 Male, age 55, unknown 23.4
2480 Male, age 75, both hemispheres 21.0
2295 Male, age 66, both hemispheres 18.2
2098 Female, age 72, unknown 15.8
2809 Male, age 90, both hemispheres 15.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 19.6
Samples: 159

Max nTPM: 44.5
Min nTPM: 5.4
Std nTPM: 8.2
Median nTPM: 18.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 44.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 41.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 40.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 38.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 36.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 35.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 35.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 34.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 34.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 33.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 33.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 33.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 32.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 32.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 32.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 32.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 32.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 31.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 30.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 30.3
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 28.9
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 28.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 28.2
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 27.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 27.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 27.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 27.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 27.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 27.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 26.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 26.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 26.8
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 26.0
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 26.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 25.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 25.7
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 25.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 25.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 25.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 25.3
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 25.1
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 25.0
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 24.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 24.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 24.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 23.9
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 23.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 23.7
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 23.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 22.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 22.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 22.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 22.0
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 21.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 21.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 21.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 21.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 21.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 21.4
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 21.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 21.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 20.9
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 20.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 20.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 20.8
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 20.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 20.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 20.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 20.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 20.1
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 19.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 19.5
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 19.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 19.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 19.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 19.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 19.0
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 18.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 18.5
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 18.5
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 18.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 18.2
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 18.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 18.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 17.8
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 17.7
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 17.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 17.5
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 17.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 17.5
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 17.4
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 17.1
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 17.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 17.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 16.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 16.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 16.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 16.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 16.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 16.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 16.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 15.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 15.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 15.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 15.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 15.5
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 15.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 15.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 15.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 15.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 15.1
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 14.9
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 14.5
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 14.5
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 14.3
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 13.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 13.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 13.4
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 13.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 13.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 13.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 13.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 12.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 12.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 12.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 12.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 12.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 11.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 11.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 11.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 11.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 11.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 11.2
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 11.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 11.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 10.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 10.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 10.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 10.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 10.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 10.1
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 10.0
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 9.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 9.6
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 9.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 8.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 8.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 8.6
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 8.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 8.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 7.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 7.6
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 7.4
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 6.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 6.6
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 6.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 6.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 5.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 5.4
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 30.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 30.0
FF:10159-103A6 76 years, female 36.6
FF:10181-103D1 60 years, female 23.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 8.1
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 7.4
Samples: 4

Max nTPM: 9.4
Min nTPM: 4.3
Sample A Female 9.4
Sample B Female 6.7
Sample C Male 4.3
Sample D Male 9.2
Ventral spinal cord
nTPM: 8.1
Samples: 4

Max nTPM: 9.9
Min nTPM: 6.5
Sample A Female 9.9
Sample B Female 6.9
Sample C Male 6.5
Sample D Male 9.2

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