We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NDUFAB1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • NDUFAB1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:127.5 nTPM
HPA Brain:66.6 nTPM
GTEx:127.5 nTPM
FANTOM5:144.8 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:179.6 nTPM
Allen mouse:1.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA076020
Glial cells Low
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 66.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 60.5
2481 Female, age 94, left hemisphere 79.8
2288 Male, age 75, left hemisphere 64.6
2290 Female, age 72, unknown 61.0
2846 Female, age 79, unknown 60.8
1781 Male, age 74, unknown 59.7
1854 Male, age 80, left hemisphere 59.5
1857 Female, age 85, left hemisphere 54.1
2289 Male, age 61, right hemisphere 44.7
Globus pallidus, externus
nTPM: 53.2
2772 Female, age 79, unknown 84.2
2395 Male, age 75, both hemispheres 56.6
1996 Male, age 80, right hemisphere 53.1
2646 Male, age 61, right hemisphere 44.4
2567 Female, age 72, unknown 27.9
Globus pallidus, internus
nTPM: 54.9
2287 Male, age 75, right hemisphere 79.2
2483 Female, age 94, right hemisphere 73.3
1818 Male, age 74, unknown 60.4
2778 Female, age 91, both hemispheres 56.9
2037 Male, age 80, right hemisphere 47.9
2566 Female, age 72, unknown 34.7
2111 Female, age 85, right hemisphere 32.0
Nucleus accumbens
nTPM: 62.5
1856 Female, age 91, right hemisphere 77.8
2286 Male, age 75, left hemisphere 71.4
1783 Male, age 74, unknown 64.7
2391 Female, age 94, left hemisphere 63.2
2824 Male, age 61, right hemisphere 63.2
1806 Female, age 85, left hemisphere 62.2
2698 Female, age 72, unknown 54.6
2732 Male, age 80, right hemisphere 43.2
Nucleus basalis of Meynert
nTPM: 54.2
2484 Female, age 94, left hemisphere 66.0
2821 Male, age 75, both hemispheres 55.1
2393 Male, age 80, right hemisphere 54.9
2569 Male, age 61, both hemispheres 40.7
Nucleus of the diagonal band
nTPM: 66.6
2775 Male, age 80, right hemisphere 84.4
1812 Female, age 91, both hemispheres 80.1
2195 Female, age 85, both hemispheres 65.2
2029 Male, age 61, right hemisphere 52.8
1979 Male, age 74, unknown 50.2
Putamen
nTPM: 57.0
2466 Female, age 79, unknown 80.9
2482 Female, age 94, left hemisphere 69.2
1937 Female, age 91, right hemisphere 63.8
1838 Male, age 80, right hemisphere 61.6
1829 Male, age 74, unknown 52.1
2647 Male, age 75, left hemisphere 38.5
2489 Female, age 72, unknown 33.0
Septal nuclei
nTPM: 61.0
1960 Male, age 74, unknown 87.9
2031 Female, age 72, unknown 81.6
2009 Female, age 91, both hemispheres 65.1
2059 Female, age 85, both hemispheres 54.2
2199 Male, age 80, right hemisphere 50.9
2394 Male, age 61, left hemisphere 44.8
2629 Female, age 94, right hemisphere 42.1
Stria terminalis, bed nucleus
nTPM: 61.8
1974 Female, age 91, both hemispheres 80.6
2486 Female, age 94, both hemispheres 54.9
2201 Male, age 74, unknown 49.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max average nTPM 127.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 112.8
Samples: 246

Max nTPM: 270.2
Min nTPM: 59.3
Std nTPM: 36.5
Median nTPM: 106.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 270.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 254.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 254.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 244.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 239.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 227.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 208.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 203.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 198.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 197.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 184.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 183.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 182.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 180.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 180.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 176.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 176.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 173.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 172.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 168.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 168.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 163.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 161.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 160.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 158.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 158.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 157.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 157.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 152.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 150.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 150.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 150.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 149.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 147.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 146.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 144.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 140.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 139.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 138.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 137.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 136.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 135.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 134.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 134.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 133.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 133.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 133.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 132.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 132.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 132.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 131.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 130.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 129.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 129.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 129.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 128.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 128.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 127.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 127.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 127.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 126.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 126.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 126.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 125.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 125.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 124.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 124.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 124.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 123.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 123.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 123.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 123.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 123.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 122.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 122.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 122.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 121.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 120.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 119.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 118.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 118.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 118.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 117.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 117.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 117.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 117.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 116.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 115.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 115.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 115.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 114.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 114.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 114.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 114.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 114.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 114.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 114.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 113.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 112.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 112.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 112.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 112.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 112.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 112.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 111.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 111.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 110.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 110.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 110.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 109.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 108.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 108.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 108.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 108.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 108.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 108.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 107.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 107.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 106.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 106.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 106.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 106.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 105.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 104.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 104.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 104.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 104.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 103.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 103.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 103.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 102.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 102.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 102.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 102.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 102.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 102.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 101.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 101.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 100.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 99.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 99.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 99.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 98.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 98.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 98.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 98.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 97.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 97.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 97.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 97.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 97.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 96.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 96.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 96.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 94.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 94.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 94.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 94.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 94.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 93.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 93.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 93.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 92.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 92.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 92.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 92.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 91.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 91.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 91.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 91.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 90.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 90.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 90.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 89.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 89.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 88.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 88.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 87.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 87.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 87.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 87.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 86.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 86.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 85.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 85.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 85.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 84.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 84.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 84.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 83.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 83.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 83.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 83.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 83.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 82.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 82.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 82.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 82.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 81.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 81.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 81.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 80.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 79.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 79.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 79.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 79.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 78.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 78.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 78.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 78.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 77.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 77.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 77.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 76.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 76.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 75.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 75.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 73.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 73.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 72.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 72.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 72.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 71.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 71.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 68.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 68.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 67.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 67.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 63.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 61.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 61.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 59.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 127.5
Samples: 246

Max nTPM: 270.2
Min nTPM: 64.3
Std nTPM: 32.9
Median nTPM: 124.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 270.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 232.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 224.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 217.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 213.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 213.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 208.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 205.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 196.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 191.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 190.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 185.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 181.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 181.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 180.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 179.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 177.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 176.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 176.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 176.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 176.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 175.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 174.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 170.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 170.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 169.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 169.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 168.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 167.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 165.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 164.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 161.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 161.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 160.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 160.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 159.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 159.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 158.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 158.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 157.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 156.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 155.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 155.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 155.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 154.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 154.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 154.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 153.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 152.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 152.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 151.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 151.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 150.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 150.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 150.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 149.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 147.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 147.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 146.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 145.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 145.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 144.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 144.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 144.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 143.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 143.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 142.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 142.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 142.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 142.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 141.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 141.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 141.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 141.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 140.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 140.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 140.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 139.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 139.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 139.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 138.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 137.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 137.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 137.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 136.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 136.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 135.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 135.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 135.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 134.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 134.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 134.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 134.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 134.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 134.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 134.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 134.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 133.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 133.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 133.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 132.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 131.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 131.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 130.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 130.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 130.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 129.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 129.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 129.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 129.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 128.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 128.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 127.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 127.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 127.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 127.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 126.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 126.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 125.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 125.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 125.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 124.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 124.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 124.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 123.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 123.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 123.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 123.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 122.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 121.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 121.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 120.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 120.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 120.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 120.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 119.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 119.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 119.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 118.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 118.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 118.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 118.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 117.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 117.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 117.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 116.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 116.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 116.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 116.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 116.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 115.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 115.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 115.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 114.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 114.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 113.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 113.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 113.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 113.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 113.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 112.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 112.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 112.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 111.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 109.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 109.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 109.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 109.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 109.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 109.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 108.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 107.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 107.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 107.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 107.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 107.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 106.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 106.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 105.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 105.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 104.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 104.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 104.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 104.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 103.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 103.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 103.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 102.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 102.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 102.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 102.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 102.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 101.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 101.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 101.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 100.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 100.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 100.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 100.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 99.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 99.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 99.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 98.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 98.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 98.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 97.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 97.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 96.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 96.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 96.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 96.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 95.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 95.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 94.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 94.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 92.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 91.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 91.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 90.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 89.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 88.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 88.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 87.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 87.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 87.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 87.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 86.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 86.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 86.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 82.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 82.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 81.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 80.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 79.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 79.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 75.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 73.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 73.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 73.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 72.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 72.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 70.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 70.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 68.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 67.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 64.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 119.1
Samples: 205

Max nTPM: 224.2
Min nTPM: 64.4
Std nTPM: 31.6
Median nTPM: 113.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 224.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 214.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 214.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 199.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 193.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 192.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 187.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 187.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 183.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 181.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 179.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 173.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 171.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 170.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 168.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 164.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 164.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 164.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 164.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 164.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 163.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 162.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 162.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 159.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 159.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 157.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 156.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 156.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 154.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 152.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 151.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 151.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 151.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 151.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 150.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 149.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 148.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 147.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 147.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 147.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 147.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 146.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 146.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 144.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 143.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 143.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 143.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 142.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 141.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 140.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 140.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 140.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 140.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 139.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 139.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 138.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 138.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 138.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 137.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 135.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 135.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 134.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 133.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 133.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 132.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 132.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 132.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 131.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 130.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 129.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 127.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 127.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 127.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 125.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 125.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 125.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 125.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 124.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 124.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 123.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 122.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 121.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 119.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 118.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 118.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 117.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 117.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 117.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 117.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 116.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 116.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 116.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 116.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 115.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 115.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 115.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 115.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 114.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 114.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 114.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 113.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 113.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 113.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 113.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 113.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 112.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 111.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 111.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 111.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 111.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 110.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 110.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 109.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 108.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 107.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 107.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 107.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 107.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 106.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 106.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 105.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 105.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 105.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 105.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 105.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 104.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 104.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 103.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 103.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 103.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 102.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 102.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 101.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 100.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 100.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 100.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 99.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 99.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 99.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 99.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 98.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 98.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 98.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 98.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 98.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 97.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 97.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 97.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 97.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 96.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 96.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 95.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 95.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 95.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 94.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 94.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 94.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 94.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 93.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 93.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 93.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 92.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 92.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 92.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 91.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 91.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 91.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 90.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 90.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 90.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 89.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 89.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 88.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 88.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 87.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 87.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 87.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 87.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 87.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 86.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 86.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 85.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 85.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 85.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 83.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 82.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 82.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 81.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 80.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 80.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 80.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 80.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 79.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 78.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 78.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 75.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 73.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 70.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 69.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 69.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 69.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 65.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 64.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 144.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 99.7
FF:10164-103B2 76 years, female 99.7
Nucleus accumbens
Scaled Tags Per Million: 101.9
FF:10037-101F1 23-56 years, mixed 101.9
Putamen
Scaled Tags Per Million: 144.8
FF:10176-103C5 60 years, female 144.8
Globus pallidus
Scaled Tags Per Million: 112.6
FF:10175-103C4 60 years, female 160.0
FF:10161-103A8 76 years, female 65.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 26.7
Pig sample Sample description nTPM
Caudate
nTPM: 24.6
Samples: 4

Max nTPM: 29.4
Min nTPM: 20.6
Sample A Female 23.4
Sample B Female 24.8
Sample C Male 29.4
Sample D Male 20.6
Putamen
nTPM: 26.7
Samples: 4

Max nTPM: 35.0
Min nTPM: 22.2
Sample A Female 23.6
Sample B Female 22.2
Sample C Male 35.0
Sample D Male 25.8
Septum
nTPM: 24.6
Samples: 4

Max nTPM: 25.8
Min nTPM: 23.4
Sample A Female 25.0
Sample B Female 23.4
Sample C Male 25.8
Sample D Male 24.3
Ventral pallidum
nTPM: 23.4
Samples: 4

Max nTPM: 26.9
Min nTPM: 20.7
Sample A Female 20.9
Sample B Female 26.9
Sample C Male 24.9
Sample D Male 20.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 179.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 145.3
Samples: 4

Max nTPM: 163.4
Min nTPM: 130.6
Sample A Male 163.4
Sample B Male 148.6
Sample C Female 138.6
Sample D Female 130.6
Septum
nTPM: 179.6
Samples: 4

Max nTPM: 204.6
Min nTPM: 157.9
Sample A Male 163.0
Sample B Male 192.8
Sample C Female 204.6
Sample D Female 157.9
Ventral forebrain
nTPM: 166.0
Samples: 4

Max nTPM: 191.2
Min nTPM: 152.1
Sample A Male 152.1
Sample B Male 162.9
Sample C Female 191.2
Sample D Female 157.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
69174341 Antisense, RP_050329_02_B11, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 1.8
69174341 Antisense, RP_050329_02_B11, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.