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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
139.0
nTPM
Monaco:
47.4
nTPM
Schmiedel:
41.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
139.0
HPA sample
nTPM
gdT-cell nTPM: 87.8
Samples: 6
Max nTPM: 126.6
Min nTPM: 58.6
P10809_1007
58.6
P10809_1022
93.5
P10809_1041
126.6
P10809_1060
82.0
P10809_1077
71.7
P10809_1098
94.2
MAIT T-cell nTPM: 83.9
Samples: 6
Max nTPM: 110.1
Min nTPM: 48.9
P10809_1006
48.9
P10809_1024
89.8
P10809_1043
95.2
P10809_1062
72.6
P10809_1083
86.8
P10809_1097
110.1
Memory CD4 T-cell nTPM: 94.5
Samples: 6
Max nTPM: 115.6
Min nTPM: 61.2
P10809_1014
61.2
P10809_1026
115.6
P10809_1045
97.8
P10809_1064
99.9
P10809_1086
90.8
P10809_1113
101.9
Memory CD8 T-cell nTPM: 97.9
Samples: 5
Max nTPM: 118.1
Min nTPM: 60.0
P10809_1012
60.0
P10809_1027
118.1
P10809_1046
97.7
P10809_1065
101.3
P10809_1111
112.5
Naive CD4 T-cell nTPM: 78.7
Samples: 6
Max nTPM: 115.3
Min nTPM: 41.5
P10809_1015
41.5
P10809_1030
72.8
P10809_1049
115.3
P10809_1068
71.7
P10809_1085
84.8
P10809_1112
86.2
Naive CD8 T-cell nTPM: 79.7
Samples: 6
Max nTPM: 94.2
Min nTPM: 45.6
P10809_1016
45.6
P10809_1031
79.0
P10809_1050
84.3
P10809_1069
87.6
P10809_1087
87.6
P10809_1110
94.2
T-reg nTPM: 139.0
Samples: 6
Max nTPM: 193.4
Min nTPM: 84.9
P10809_1018
84.9
P10809_1037
114.2
P10809_1056
193.4
P10809_1075
128.8
P10809_1094
146.4
P10809_1106
166.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 33.4
Samples: 4
Max nTPM: 40.6
Min nTPM: 25.0
RHH5202_R3573
40.1
RHH5230_R3602
27.8
RHH5259_R3631
40.6
RHH5288_R3660
25.0
Effector memory CD8 T-cell nTPM: 35.7
Samples: 4
Max nTPM: 42.6
Min nTPM: 23.8
RHH5203_R3574
36.5
RHH5231_R3603
42.6
RHH5260_R3632
39.8
RHH5289_R3661
23.8
MAIT T-cell nTPM: 28.3
Samples: 4
Max nTPM: 35.0
Min nTPM: 20.7
RHH5233_R3605
20.7
RHH5205_R3576
26.9
RHH5262_R3634
35.0
RHH5297_R3663
30.5
Memory CD4 T-cell TFH nTPM: 29.2
Samples: 4
Max nTPM: 40.0
Min nTPM: 23.6
RHH5300_R3666
24.8
RHH5236_R3608
40.0
RHH5265_R3637
23.6
RHH5208_R3579
28.3
Memory CD4 T-cell Th1 nTPM: 38.7
Samples: 4
Max nTPM: 48.2
Min nTPM: 28.6
RHH5210_R3581
28.6
RHH5302_R3668
41.0
RHH5238_R3610
37.0
RHH5267_R3639
48.2
Memory CD4 T-cell Th1/Th17 nTPM: 32.3
Samples: 4
Max nTPM: 44.4
Min nTPM: 21.2
RHH5303_R3669
40.0
RHH5211_R3582
21.2
RHH5239_R3611
23.4
RHH5268_R3640
44.4
Memory CD4 T-cell Th17 nTPM: 28.1
Samples: 4
Max nTPM: 36.4
Min nTPM: 22.8
RHH5304_R3670
36.4
RHH5212_R3583
27.1
RHH5240_R3612
22.8
RHH5269_R3641
26.1
Memory CD4 T-cell Th2 nTPM: 34.4
Samples: 4
Max nTPM: 37.1
Min nTPM: 30.2
RHH5305_R3671
34.1
RHH5213_R3584
37.1
RHH5241_R3613
30.2
RHH5270_R3642
36.3
Naive CD4 T-cell nTPM: 35.6
Samples: 4
Max nTPM: 45.8
Min nTPM: 23.7
RHH5306_R3672
37.7
RHH5214_R3585
45.8
RHH5242_R3614
23.7
RHH5271_R3643
35.3
Naive CD8 T-cell nTPM: 27.2
Samples: 4
Max nTPM: 32.3
Min nTPM: 22.6
RHH5201_R3572
22.6
RHH5229_R3601
25.0
RHH5258_R3630
28.7
RHH5287_R3659
32.3
Non-Vd2 gdTCR nTPM: 34.3
Samples: 4
Max nTPM: 42.8
Min nTPM: 23.5
RHH5235_R3607
29.7
RHH5264_R3636
41.3
RHH5207_R3578
23.5
RHH5299_R3665
42.8
T-reg nTPM: 32.2
Samples: 4
Max nTPM: 35.8
Min nTPM: 23.1
RHH5301_R3667
35.8
RHH5237_R3609
35.6
RHH5266_R3638
34.3
RHH5209_R3580
23.1
Terminal effector memory CD4 T-cell nTPM: 41.3
Samples: 2
Max nTPM: 43.9
Min nTPM: 38.6
RHH5243_R3615
38.6
RHH5272_R3644
43.9
Terminal effector memory CD8 T-cell nTPM: 46.3
Samples: 4
Max nTPM: 65.6
Min nTPM: 35.0
RHH5232_R3604
35.0
RHH5204_R3575
65.6
RHH5261_R3633
47.3
RHH5296_R3662
37.1
Vd2 gdTCR nTPM: 47.4
Samples: 4
Max nTPM: 60.9
Min nTPM: 24.7
RHH5234_R3606
24.7
RHH5206_R3577
60.7
RHH5263_R3635
43.4
RHH5298_R3664
60.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
