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TISSUE PONS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:87.4 nTPM
HPA:87.4 nTPM
FANTOM5:55.1 Scaled Tags Per Million

PONS - Annotated protein expression
Pending normal tissue analysis

PONS - HPA Brain RNA-seq
Max nTPM 87.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 84.8
2301 Female, age 85, both hemispheres 87.1
2188 Female, age 91, both hemispheres 85.9
2090 Male, age 80, both hemispheres 84.4
1984 Male, age 76, both hemispheres 81.9
Dorsal cochlear nucleus
nTPM: 85.8
2802 Male, age 74, right hemisphere 87.6
2370 Male, age 61, both hemispheres 87.1
2378 Male, age 80, both hemispheres 86.2
2187 Female, age 91, both hemispheres 85.1
2058 Male, age 76, both hemispheres 83.3
Dorsal tegmental nucleus
nTPM: 86.6
2358 Male, age 61, both hemispheres 91.8
2083 Male, age 80, both hemispheres 86.9
1936 Male, age 76, left hemisphere 84.1
2326 Male, age 74, both hemispheres 83.8
Dorsolateral tegmental area
nTPM: 84.7
2337 Male, age 61, both hemispheres 87.1
2654 Male, age 80, both hemispheres 86.0
2751 Female, age 85, both hemispheres 84.5
2360 Male, age 74, both hemispheres 83.1
2141 Male, age 76, both hemispheres 82.8
Kolliker-Fuse nucleus
nTPM: 86.9
2793 Female, age 91, left hemisphere 89.3
2163 Male, age 80, both hemispheres 87.4
2315 Male, age 76, right hemisphere 83.9
Lateral lemniscal nuclei
nTPM: 81.6
2169 Male, age 76, both hemispheres 83.9
2320 Female, age 91, left hemisphere 82.1
2746 Female, age 85, left hemisphere 81.7
2453 Male, age 74, right hemisphere 80.1
2036 Male, age 80, both hemispheres 80.0
Lateral parabrachial nucleus
nTPM: 85.5
2792 Male, age 76, both hemispheres 87.3
2013 Male, age 80, both hemispheres 86.0
2790 Male, age 61, both hemispheres 85.2
2139 Female, age 85, right hemisphere 83.7
Lateral vestibular nucleus
nTPM: 86.8
2311 Male, age 80, both hemispheres 88.0
2184 Male, age 76, both hemispheres 85.6
Locus coeruleus
nTPM: 84.0
2720 Male, age 74, both hemispheres 86.7
2162 Male, age 80, both hemispheres 85.8
1980 Male, age 76, both hemispheres 83.9
2014 Male, age 55, unknown 83.8
2123 Female, age 91, both hemispheres 82.9
2317 Female, age 72, unknown 82.9
2788 Male, age 74, unknown 82.1
Medial olivary nucleus
nTPM: 85.7
2851 Male, age 80, both hemispheres 88.6
2138 Female, age 91, both hemispheres 85.6
1943 Male, age 61, both hemispheres 85.4
1962 Male, age 76, both hemispheres 83.3
Medial parabrachial nucleus
nTPM: 84.8
2170 Female, age 91, both hemispheres 86.5
2854 Male, age 80, both hemispheres 85.6
2156 Male, age 61, both hemispheres 85.2
2786 Male, age 76, both hemispheres 84.9
2463 Female, age 85, right hemisphere 81.9
Medial periolivary nuclei
nTPM: 82.1
2063 Male, age 76, both hemispheres 82.6
2171 Female, age 85, both hemispheres 82.5
2791 Male, age 74, right hemisphere 82.4
2458 Female, age 91, both hemispheres 81.5
2081 Male, age 80, both hemispheres 81.4
Motor facial nucleus
nTPM: 83.6
2697 Female, age 85, both hemispheres 85.8
2365 Male, age 74, right hemisphere 84.6
2795 Female, age 91, both hemispheres 84.6
2126 Male, age 61, both hemispheres 83.8
2062 Male, age 76, both hemispheres 82.0
2327 Male, age 80, both hemispheres 81.1
Motor trigeminal nucleus
nTPM: 83.2
2309 Male, age 76, both hemispheres 86.0
2335 Male, age 61, both hemispheres 85.0
2560 Male, age 74, both hemispheres 82.4
2321 Female, age 91, both hemispheres 82.1
2079 Male, age 80, both hemispheres 80.2
Nuclei of the trapezoid body
nTPM: 81.9
2166 Male, age 80, both hemispheres 84.3
1983 Male, age 76, both hemispheres 84.0
2159 Male, age 61, both hemispheres 81.0
2368 Female, age 91, both hemispheres 80.9
2735 Female, age 85, both hemispheres 79.2
Paramedian reticular nucleus
nTPM: 83.8
2313 Male, age 61, both hemispheres 84.4
2052 Male, age 76, both hemispheres 84.2
2050 Female, age 85, both hemispheres 83.2
2057 Male, age 80, both hemispheres 83.2
Pontine nuclei
nTPM: 82.7
1968 Male, age 76, left hemisphere 84.1
2109 Female, age 72, unknown 83.8
2115 Male, age 80, left hemisphere 83.3
2319 Female, age 91, both hemispheres 83.3
2787 Female, age 85, both hemispheres 83.3
1863 Male, age 55, unknown 83.2
2454 Male, age 74, left hemisphere 81.0
2727 Male, age 61, right hemisphere 79.8
Pontine raphe nucleus
nTPM: 82.4
2853 Male, age 76, midline 84.0
2122 Female, age 85, midline 80.8
Posteroventral cochlear nucleus
nTPM: 84.5
2371 Male, age 61, both hemispheres 87.9
2341 Male, age 80, both hemispheres 85.3
2135 Female, age 91, both hemispheres 84.3
2070 Male, age 76, both hemispheres 84.0
2752 Female, age 85, both hemispheres 81.0
Principal sensory trigeminal nucleus
nTPM: 83.2
2324 Male, age 76, both hemispheres 85.7
2367 Female, age 91, left hemisphere 83.8
2158 Male, age 61, both hemispheres 83.0
2008 Male, age 80, left hemisphere 80.2
Reticular pontine nucleus, caudal
nTPM: 82.6
2092 Male, age 76, both hemispheres 84.0
2457 Female, age 91, both hemispheres 83.5
2559 Male, age 74, both hemispheres 81.8
2332 Male, age 80, right hemisphere 80.9
Reticular pontine nucleus, oral
nTPM: 85.0
2167 Male, age 76, both hemispheres 87.1
2361 Male, age 74, both hemispheres 87.1
2366 Female, age 91, both hemispheres 86.1
1939 Male, age 80, both hemispheres 84.2
2012 Female, age 85, both hemispheres 80.7
Reticulotegmental nucleus
nTPM: 83.4
2322 Female, age 91, both hemispheres 85.6
2333 Male, age 80, both hemispheres 83.6
2325 Male, age 76, both hemispheres 82.2
2452 Male, age 74, both hemispheres 82.1
Spinal trigeminal nucleus, oral
nTPM: 84.0
2164 Male, age 80, both hemispheres 86.0
1978 Male, age 76, both hemispheres 84.4
2737 Female, age 85, both hemispheres 81.5
Subcoeruleus area
nTPM: 83.7
1958 Male, age 80, both hemispheres 85.1
2323 Female, age 91, left hemisphere 83.6
2369 Female, age 85, left hemisphere 83.6
2089 Male, age 76, left hemisphere 83.2
2451 Male, age 74, both hemispheres 82.9
Superior olive
nTPM: 82.4
2364 Male, age 74, right hemisphere 83.9
2020 Male, age 76, both hemispheres 83.3
2561 Female, age 91, both hemispheres 82.9
2329 Male, age 80, right hemisphere 82.0
1875 Female, age 85, both hemispheres 80.1
Superior vestibular nucleus
nTPM: 87.4
2383 Male, age 74, both hemispheres 91.0
2061 Male, age 76, both hemispheres 87.5
2015 Male, age 80, both hemispheres 83.7
Ventral periolivary nuclei
nTPM: 82.2
2165 Male, age 80, both hemispheres 83.3
2794 Female, age 91, left hemisphere 82.6
2130 Female, age 85, both hemispheres 82.1
2023 Male, age 76, both hemispheres 81.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 83.5
2359 Male, age 61, both hemispheres 87.4
2840 Female, age 85, both hemispheres 84.8
2456 Female, age 91, both hemispheres 83.3
2161 Male, age 80, both hemispheres 82.7
2449 Male, age 74, both hemispheres 81.7
1959 Male, age 76, both hemispheres 81.0

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 55.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 55.1
FF:10182-103D2 60 years, female 65.8
FF:10165-103B3 76 years, female 44.4
Pons
Scaled Tags Per Million: 18.5
FF:10033-101E6 18-54 years, mixed 18.5

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