HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:13.2 nTPM
FANTOM5:9.1 Scaled Tags Per Million
Pig:0.9 nTPM
Mouse:21.1 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041493Antibody HPA041793
Glial cells LowNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
2529 Female, age 94, left hemisphere 16.3
1911 Female, age 85, right hemisphere 15.2
2621 Female, age 67, right hemisphere 12.4
1898 Male, age 80, left hemisphere 11.6
2148 Female, age 91, left hemisphere 11.5
1855 Male, age 76, left hemisphere 11.1
Dentate gyrus
nTPM: 15.8
2246 Female, age 85, both hemispheres 20.4
2010 Male, age 76, both hemispheres 19.5
2528 Male, age 74, both hemispheres 18.3
1927 Female, age 91, both hemispheres 12.7
2531 Female, age 67, both hemispheres 12.4
2530 Female, age 94, left hemisphere 11.8
Entorhinal gyrus
nTPM: 14.7
2117 Female, age 91, right hemisphere 19.6
2686 Male, age 75, right hemisphere 16.6
1787 Male, age 76, left hemisphere 14.9
1938 Female, age 85, left hemisphere 13.3
2613 Female, age 94, left hemisphere 12.1
2764 Male, age 80, right hemisphere 11.7
Hippocampus, CA1
nTPM: 14.4
2082 Female, age 91, right hemisphere 21.3
2045 Male, age 76, both hemispheres 16.8
1873 Female, age 85, both hemispheres 14.4
2527 Male, age 74, both hemispheres 11.4
2749 Male, age 80, left hemisphere 8.2
Hippocampus, CA2
nTPM: 16.0
2249 Male, age 74, both hemispheres 23.0
2437 Female, age 94, left hemisphere 18.1
1940 Female, age 85, left hemisphere 16.5
2113 Female, age 91, right hemisphere 15.4
1892 Male, age 76, both hemispheres 13.5
1963 Male, age 80, left hemisphere 9.6
Hippocampus, CA3
nTPM: 12.9
2436 Male, age 74, both hemispheres 15.3
1867 Male, age 76, both hemispheres 13.9
2620 Female, age 94, left hemisphere 13.3
1891 Female, age 85, both hemispheres 12.8
2137 Male, age 80, left hemisphere 11.7
2861 Female, age 67, both hemispheres 10.4
Parahippocampal cortex
nTPM: 17.3
2250 Female, age 67, right hemisphere 24.0
2622 Female, age 67, right hemisphere 19.4
2693 Female, age 94, both hemispheres 18.5
2245 Female, age 91, both hemispheres 17.9
1933 Female, age 85, both hemispheres 17.2
2692 Male, age 74, both hemispheres 17.0
1990 Female, age 91, right hemisphere 15.9
2018 Male, age 76, both hemispheres 14.9
2532 Female, age 72, left hemisphere 14.8
1850 Male, age 80, both hemispheres 13.7
Perirhinal gyrus
nTPM: 22.0
2521 Female, age 94, right hemisphere 29.4
1841 Female, age 85, right hemisphere 23.0
1847 Female, age 91, left hemisphere 21.4
1794 Male, age 80, right hemisphere 18.6
2848 Male, age 76, right hemisphere 17.5
Subiculum
nTPM: 15.5
2619 Male, age 74, both hemispheres 22.9
2438 Female, age 94, left hemisphere 19.6
1977 Female, age 85, both hemispheres 16.1
2729 Female, age 91, right hemisphere 12.3
2042 Male, age 76, both hemispheres 11.9
1901 Male, age 80, both hemispheres 10.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 67.8
Min nTPM: 0.2
Std nTPM: 13.2
Median nTPM: 9.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 67.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 64.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 61.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 57.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 56.4
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 50.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 50.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 50.5
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 47.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 44.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 42.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.1
FF:10153-102I9 76 years, female 14.1
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.9
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.3
Sample A Female 1.3
Sample B Female 0.8
Sample C Male 0.3
Sample D Male 1.1
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.3
Sample A Female 0.6
Sample B Female 0.3
Sample C Male 0.3
Sample D Male 0.4
Subiculum
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.3
Sample A Female 0.6
Sample B Female 0.4
Sample C Male 0.3
Sample D Male 0.4
Ventral hippocampus
nTPM: 0.5
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.4
Sample A Female 0.4
Sample B Female 0.5
Sample C Male 0.8
Sample D Male 0.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 8.8
Min nTPM: 0.8
Sample A Male 6.1
Sample B Male 0.8
Sample C Female 8.8
Sample D Female 2.5
Hippocampal formation
nTPM: 21.1
Samples: 4

Max nTPM: 30.3
Min nTPM: 15.9
Sample A Male 15.9
Sample B Male 30.3
Sample C Female 18.3
Sample D Female 19.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
69608064 Antisense, RP_050426_03_D09, Mouse strain C57BL/6J (56 days, male) 3.3
72283808 Antisense, RP_051027_01_C03, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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