We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
TMEM98
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • TMEM98
TISSUE PRIMARY DATA AMYGDALA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Amygdala
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:36.2 nTPM
HPA Brain:53.2 nTPM
GTEx:36.2 nTPM
FANTOM5:16.9 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:9.7 nTPM
Allen mouse:12.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 53.2
Sample id Sample description nTPM
Amygdala
nTPM: 48.5
2814 Male, age 76, right hemisphere 68.7
2517 Female, age 94, left hemisphere 48.4
2695 Female, age 67, right hemisphere 47.6
2514 Male, age 75, right hemisphere 46.1
1987 Female, age 91, left hemisphere 31.8
Basal amygdala
nTPM: 40.3
2827 Female, age 67, right hemisphere 55.8
2685 Female, age 94, left hemisphere 47.6
2110 Male, age 80, left hemisphere 43.3
2609 Male, age 75, right hemisphere 37.9
1955 Male, age 76, both hemispheres 35.4
2243 Female, age 91, right hemisphere 22.1
Central amygdala
nTPM: 43.9
1905 Male, age 76, both hemispheres 63.1
2826 Female, age 94, left hemisphere 41.4
2701 Female, age 91, right hemisphere 39.7
2239 Male, age 80, left hemisphere 38.9
2515 Male, age 75, right hemisphere 36.3
Corticomedial amygdala
nTPM: 30.0
2429 Female, age 94, left hemisphere 46.0
2428 Male, age 75, right hemisphere 35.4
2535 Female, age 67, right hemisphere 34.3
2240 Male, age 76, both hemispheres 25.8
2829 Male, age 80, left hemisphere 21.6
2242 Female, age 91, right hemisphere 16.7
Lateral amygdala
nTPM: 53.2
2830 Female, age 67, right hemisphere 74.5
1883 Male, age 76, both hemispheres 58.8
2516 Male, age 75, right hemisphere 53.0
2256 Male, age 80, left hemisphere 51.0
2534 Female, age 94, left hemisphere 42.4
2255 Female, age 91, right hemisphere 39.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 36.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 36.2
Samples: 152

Max nTPM: 107.0
Min nTPM: 5.8
Std nTPM: 15.2
Median nTPM: 33.8
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 107.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 79.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 79.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 74.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 65.8
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 64.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 63.1
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 60.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 59.8
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 59.3
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 59.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 59.1
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 58.4
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 57.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 57.8
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 57.5
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 56.8
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 56.6
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 56.1
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 55.0
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 53.2
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 52.8
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 52.7
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 51.9
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 50.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 50.7
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 50.4
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 49.5
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 48.4
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 48.2
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 47.4
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 46.9
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 46.9
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 46.5
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 46.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 46.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 45.1
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 45.1
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 44.5
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 43.3
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 42.6
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 42.2
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 41.9
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 41.8
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 41.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 41.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 41.4
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 41.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 41.0
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 40.9
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 40.3
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 40.3
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 39.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 39.6
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 39.5
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 39.3
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 38.6
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 38.5
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 38.3
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 38.1
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 37.8
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 37.7
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 37.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 36.9
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 36.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 35.9
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 35.7
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 35.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 35.7
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 35.5
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 35.0
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 35.0
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 34.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 34.7
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 34.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 34.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 33.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 33.5
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 33.3
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 33.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 33.2
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 33.0
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 32.7
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 32.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 32.4
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 32.3
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 31.5
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 31.3
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 30.9
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 30.6
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 30.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 30.2
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 30.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 29.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 29.6
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 29.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 28.9
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 28.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 28.7
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 28.6
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 27.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 27.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 27.0
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 27.0
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 26.8
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 26.7
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 26.7
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 26.4
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 26.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 26.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 26.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 25.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 25.7
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 25.6
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 25.6
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 25.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 25.2
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 24.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 23.3
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 23.2
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 23.0
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 22.7
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 22.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 22.3
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 22.2
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 22.2
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 22.2
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 22.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 22.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 21.8
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 21.6
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 21.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 21.2
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 21.1
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 21.1
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 20.8
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 20.1
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 19.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 18.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 18.3
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 18.3
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 18.0
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 17.9
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 17.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 17.3
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 17.0
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 15.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 15.3
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 13.1
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 11.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 10.1
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 5.8
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max Scaled Tags Per Million 16.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 16.9
FF:10151-102I7 76 years, female 16.9

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 16.1
Pig sample Sample description nTPM
Amygdala
nTPM: 16.1
Samples: 4

Max nTPM: 20.7
Min nTPM: 12.4
Sample A Female 12.9
Sample B Female 20.7
Sample C Male 18.3
Sample D Male 12.4

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM 9.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 9.8
Samples: 4

Max nTPM: 12.4
Min nTPM: 8.6
Sample A Male 8.6
Sample B Male 9.0
Sample C Female 12.4
Sample D Female 9.0

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 12.8
576427 Antisense, RP_040826_01_H01, Mouse strain C57BL/6J (56 days, male) 12.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.