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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:34.2 nTPM
HPA:34.2 nTPM
GTEx:236.5 nTPM
FANTOM5:180.8 Scaled Tags Per Million
Pig:388.8 nTPM
Mouse:560.0 nTPM
Allen mouse:9.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA014429
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 34.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 34.2
2290 Female, age 72, unknown 56.4
1854 Male, age 80, left hemisphere 43.7
2846 Female, age 79, unknown 36.7
2289 Male, age 61, right hemisphere 34.2
1857 Female, age 85, left hemisphere 31.0
2288 Male, age 75, left hemisphere 30.2
1781 Male, age 74, unknown 21.3
2481 Female, age 94, left hemisphere 19.9
Claustrum
nTPM: 5.1
2196 Female, age 79, unknown 11.0
2284 Female, age 91, both hemispheres 7.6
2392 Female, age 94, both hemispheres 6.4
2568 Male, age 61, both hemispheres 5.6
2198 Male, age 80, both hemispheres 5.0
1956 Male, age 74, unknown 4.4
2491 Male, age 75, both hemispheres 2.2
2645 Female, age 72, unknown 2.2
2292 Female, age 85, both hemispheres 1.5
Globus pallidus, externus
nTPM: 3.6
2646 Male, age 61, right hemisphere 6.4
2395 Male, age 75, both hemispheres 5.0
2772 Female, age 79, unknown 2.6
1996 Male, age 80, right hemisphere 2.1
2567 Female, age 72, unknown 1.7
Globus pallidus, internus
nTPM: 3.1
2483 Female, age 94, right hemisphere 8.7
2287 Male, age 75, right hemisphere 3.2
2566 Female, age 72, unknown 2.4
2037 Male, age 80, right hemisphere 2.3
1818 Male, age 74, unknown 2.1
2778 Female, age 91, both hemispheres 2.0
2111 Female, age 85, right hemisphere 1.3
Nucleus accumbens
nTPM: 26.9
1856 Female, age 91, right hemisphere 50.3
1783 Male, age 74, unknown 36.6
2824 Male, age 61, right hemisphere 30.4
1806 Female, age 85, left hemisphere 27.7
2286 Male, age 75, left hemisphere 24.4
2698 Female, age 72, unknown 24.0
2391 Female, age 94, left hemisphere 11.7
2732 Male, age 80, right hemisphere 10.2
Nucleus basalis of Meynert
nTPM: 25.5
2393 Male, age 80, right hemisphere 46.5
2484 Female, age 94, left hemisphere 33.2
2821 Male, age 75, both hemispheres 16.4
2569 Male, age 61, both hemispheres 6.0
Nucleus of the diagonal band
nTPM: 5.2
1812 Female, age 91, both hemispheres 7.0
2775 Male, age 80, right hemisphere 6.1
1979 Male, age 74, unknown 5.5
2195 Female, age 85, both hemispheres 4.4
2029 Male, age 61, right hemisphere 2.9
Olfactory tubercle
nTPM: 4.9
1998 Female, age 91, both hemispheres 5.5
2487 Female, age 94, left hemisphere 5.4
1846 Male, age 80, right hemisphere 5.2
2856 Male, age 75, right hemisphere 3.4
Putamen
nTPM: 30.9
1937 Female, age 91, right hemisphere 44.3
1829 Male, age 74, unknown 44.1
2466 Female, age 79, unknown 43.1
1838 Male, age 80, right hemisphere 37.5
2489 Female, age 72, unknown 17.7
2647 Male, age 75, left hemisphere 14.9
2482 Female, age 94, left hemisphere 14.4
Septal nuclei
nTPM: 4.7
1960 Male, age 74, unknown 7.7
2031 Female, age 72, unknown 6.2
2009 Female, age 91, both hemispheres 4.6
2629 Female, age 94, right hemisphere 4.5
2394 Male, age 61, left hemisphere 4.2
2059 Female, age 85, both hemispheres 4.1
2199 Male, age 80, right hemisphere 1.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 236.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 236.5
Samples: 246

Max nTPM: 1271.2
Min nTPM: 0.8
Std nTPM: 177.2
Median nTPM: 216.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1271.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 755.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 718.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 675.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 673.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 655.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 637.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 627.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 609.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 607.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 598.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 596.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 556.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 527.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 518.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 515.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 509.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 502.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 492.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 486.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 482.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 479.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 479.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 463.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 449.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 449.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 449.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 443.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 442.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 435.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 430.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 424.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 421.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 416.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 405.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 404.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 398.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 397.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 395.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 392.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 390.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 387.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 387.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 384.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 384.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 378.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 376.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 376.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 375.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 375.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 371.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 370.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 367.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 366.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 366.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 365.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 364.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 360.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 358.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 358.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 354.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 352.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 346.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 346.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 342.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 339.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 334.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 333.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 326.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 325.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 322.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 322.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 319.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 315.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 308.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 306.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 306.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 306.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 300.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 300.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 296.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 295.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 293.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 290.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 287.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 283.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 278.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 272.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 268.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 267.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 267.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 263.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 262.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 261.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 260.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 255.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 252.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 252.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 251.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 249.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 248.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 248.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 246.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 245.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 243.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 241.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 241.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 237.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 237.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 237.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 236.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 236.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 232.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 232.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 231.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 231.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 231.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 229.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 226.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 226.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 224.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 220.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 217.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 216.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 207.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 198.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 197.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 197.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 195.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 194.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 193.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 192.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 190.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 186.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 186.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 186.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 182.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 181.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 178.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 177.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 175.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 174.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 174.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 172.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 167.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 166.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 166.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 166.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 163.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 158.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 156.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 156.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 156.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 153.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 147.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 145.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 144.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 140.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 133.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 133.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 131.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 131.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 127.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 125.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 121.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 121.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 120.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 119.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 118.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 117.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 116.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 116.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 116.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 116.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 112.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 111.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 110.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 110.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 110.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 109.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 106.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 104.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 97.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 95.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 91.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 91.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 88.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 88.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 88.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 86.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 82.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 79.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 75.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 75.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 66.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 65.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 63.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 63.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 56.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 53.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 47.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 45.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 40.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 40.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 39.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 36.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 34.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 32.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 31.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 31.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 30.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 24.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 23.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 23.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 20.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 20.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 19.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 12.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 11.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 9.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 5.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 4.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 4.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 0.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 158.5
Samples: 246

Max nTPM: 1258.5
Min nTPM: 1.8
Std nTPM: 116.5
Median nTPM: 144.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1258.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 485.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 409.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 364.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 353.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 349.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 345.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 328.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 326.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 322.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 321.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 321.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 313.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 305.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 298.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 297.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 295.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 294.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 291.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 282.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 281.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 279.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 277.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 273.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 270.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 270.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 269.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 266.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 264.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 264.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 264.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 261.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 260.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 260.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 258.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 255.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 255.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 254.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 253.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 251.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 247.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 246.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 246.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 245.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 242.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 239.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 236.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 235.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 235.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 233.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 232.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 230.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 230.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 230.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 229.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 228.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 228.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 228.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 227.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 226.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 224.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 224.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 222.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 222.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 220.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 220.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 218.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 216.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 216.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 216.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 215.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 214.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 214.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 211.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 210.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 208.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 206.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 206.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 206.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 205.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 205.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 204.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 204.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 204.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 204.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 203.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 203.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 203.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 200.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 199.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 197.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 193.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 193.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 191.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 190.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 189.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 187.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 186.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 186.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 185.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 183.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 182.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 182.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 182.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 181.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 181.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 178.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 176.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 173.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 168.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 166.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 165.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 164.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 162.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 161.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 160.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 159.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 158.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 156.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 154.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 152.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 148.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 145.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 144.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 144.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 142.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 142.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 140.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 140.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 139.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 137.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 136.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 135.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 135.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 135.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 131.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 130.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 130.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 129.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 128.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 127.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 127.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 125.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 125.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 125.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 125.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 123.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 122.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 121.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 119.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 119.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 117.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 117.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 116.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 114.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 114.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 113.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 113.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 113.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 112.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 107.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 105.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 105.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 104.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 103.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 103.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 101.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 99.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 99.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 98.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 97.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 97.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 97.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 96.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 92.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 91.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 90.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 90.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 89.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 86.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 85.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 85.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 84.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 83.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 82.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 78.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 75.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 73.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 73.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 72.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 70.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 67.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 66.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 65.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 65.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 65.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 64.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 64.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 63.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 55.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 53.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 52.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 51.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 50.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 50.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 48.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 47.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 45.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 43.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 42.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 37.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 36.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 36.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 35.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 33.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 33.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 31.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 31.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 27.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 26.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 25.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 25.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 23.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 22.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 21.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 19.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 18.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 17.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 16.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 16.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 12.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 11.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 11.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 9.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 7.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 7.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 7.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 5.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 4.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 4.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1.8
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Brain - Putamen (basal ganglia)
Average nTPM: 194.3
Samples: 205

Max nTPM: 713.8
Min nTPM: 1.4
Std nTPM: 138.9
Median nTPM: 180.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 713.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 663.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 589.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 550.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 522.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 487.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 486.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 482.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 478.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 463.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 459.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 434.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 419.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 412.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 409.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 407.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 397.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 396.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 388.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 383.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 382.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 381.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 379.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 377.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 350.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 350.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 345.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 339.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 339.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 337.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 334.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 327.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 324.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 321.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 321.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 316.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 312.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 311.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 311.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 307.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 302.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 301.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 299.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 296.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 294.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 291.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 291.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 289.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 287.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 282.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 281.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 281.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 280.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 278.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 277.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 273.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 270.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 269.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 263.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 258.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 254.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 254.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 254.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 253.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 249.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 248.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 248.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 247.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 243.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 241.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 240.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 240.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 237.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 233.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 232.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 231.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 230.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 230.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 229.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 220.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 219.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 218.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 217.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 216.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 209.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 207.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 204.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 202.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 201.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 201.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 201.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 197.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 197.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 195.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 194.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 190.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 189.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 184.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 183.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 183.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 183.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 182.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 180.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 173.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 172.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 169.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 169.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 162.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 161.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 156.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 155.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 154.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 152.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 152.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 150.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 148.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 148.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 147.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 147.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 147.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 147.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 143.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 143.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 141.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 140.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 139.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 139.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 136.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 130.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 130.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 128.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 126.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 125.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 125.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 125.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 121.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 119.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 114.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 114.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 114.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 112.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 109.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 106.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 105.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 104.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 104.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 98.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 92.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 91.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 90.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 85.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 84.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 82.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 82.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 81.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 80.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 78.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 76.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 73.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 73.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 69.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 68.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 61.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 60.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 53.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 52.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 51.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 48.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 48.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 48.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 42.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 41.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 38.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 34.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 27.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 27.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 26.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 26.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 25.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 25.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 25.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 23.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 22.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 21.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 17.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 16.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 15.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 14.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 13.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 13.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 10.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 5.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 4.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 180.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 78.9
FF:10164-103B2 76 years, female 78.9
Globus pallidus
Scaled Tags Per Million: 77.6
FF:10175-103C4 60 years, female 144.4
FF:10161-103A8 76 years, female 10.8
Nucleus accumbens
Scaled Tags Per Million: 114.5
FF:10037-101F1 23-56 years, mixed 114.5
Putamen
Scaled Tags Per Million: 180.8
FF:10176-103C5 60 years, female 180.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 388.8
Pig sample Sample description nTPM
Caudate
nTPM: 264.5
Samples: 4

Max nTPM: 324.8
Min nTPM: 206.5
Sample A Female 206.5
Sample B Female 233.7
Sample C Male 324.8
Sample D Male 292.8
Putamen
nTPM: 388.8
Samples: 4

Max nTPM: 690.4
Min nTPM: 108.0
Sample A Female 108.0
Sample B Female 385.4
Sample C Male 690.4
Sample D Male 371.4
Septum
nTPM: 94.0
Samples: 4

Max nTPM: 200.0
Min nTPM: 2.9
Sample A Female 200.0
Sample B Female 159.4
Sample C Male 13.6
Sample D Male 2.9
Ventral pallidum
nTPM: 183.1
Samples: 4

Max nTPM: 269.1
Min nTPM: 27.5
Sample A Female 269.1
Sample B Female 232.5
Sample C Male 27.5
Sample D Male 203.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 560.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 489.6
Samples: 4

Max nTPM: 516.3
Min nTPM: 450.8
Sample A Male 500.3
Sample B Male 516.3
Sample C Female 491.0
Sample D Female 450.8
Septum
nTPM: 75.6
Samples: 4

Max nTPM: 124.4
Min nTPM: 35.2
Sample A Male 124.4
Sample B Male 35.2
Sample C Female 85.3
Sample D Female 57.4
Ventral forebrain
nTPM: 560.1
Samples: 4

Max nTPM: 674.5
Min nTPM: 507.7
Sample A Male 520.6
Sample B Male 507.7
Sample C Female 674.5
Sample D Female 537.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.2
1038 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 9.2
1039 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 5.7
Pallidum
Expression energy: 5.6
1039 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 5.6
1038 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 2.9

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