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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:8.5 nTPM
HPA:8.5 nTPM
GTEx:28.2 nTPM
FANTOM5:29.5 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:26.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014429
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.5
Sample id Sample description nTPM
Hippocampus
nTPM: 6.2
1855 Male, age 76, left hemisphere 8.5
1911 Female, age 85, right hemisphere 7.6
2621 Female, age 67, right hemisphere 7.5
1898 Male, age 80, left hemisphere 5.9
2860 Male, age 74, right hemisphere 5.1
2148 Female, age 91, left hemisphere 4.8
2529 Female, age 94, left hemisphere 4.0
Dentate gyrus
nTPM: 8.1
2010 Male, age 76, both hemispheres 14.5
1927 Female, age 91, both hemispheres 10.8
2246 Female, age 85, both hemispheres 8.9
2530 Female, age 94, left hemisphere 5.5
2528 Male, age 74, both hemispheres 4.9
2531 Female, age 67, both hemispheres 3.7
Entorhinal gyrus
nTPM: 5.1
1787 Male, age 76, left hemisphere 7.7
2764 Male, age 80, right hemisphere 5.4
2686 Male, age 75, right hemisphere 4.6
1938 Female, age 85, left hemisphere 4.4
2613 Female, age 94, left hemisphere 4.3
2117 Female, age 91, right hemisphere 3.9
Hippocampus, CA1
nTPM: 6.8
2045 Male, age 76, both hemispheres 11.0
2749 Male, age 80, left hemisphere 8.9
1873 Female, age 85, both hemispheres 6.9
2343 Female, age 94, left hemisphere 5.1
2527 Male, age 74, both hemispheres 4.9
2082 Female, age 91, right hemisphere 4.2
Hippocampus, CA2
nTPM: 8.5
1892 Male, age 76, both hemispheres 24.4
2342 Male, age 74, both hemispheres 8.6
1963 Male, age 80, left hemisphere 5.6
2113 Female, age 91, right hemisphere 4.6
2437 Female, age 94, left hemisphere 4.2
1940 Female, age 85, left hemisphere 3.8
Hippocampus, CA3
nTPM: 7.5
1867 Male, age 76, both hemispheres 19.6
2137 Male, age 80, left hemisphere 5.8
1891 Female, age 85, both hemispheres 5.4
2436 Male, age 74, both hemispheres 5.3
2861 Female, age 67, both hemispheres 4.7
2620 Female, age 94, left hemisphere 4.2
Parahippocampal cortex
nTPM: 5.6
2718 Female, age 67, right hemisphere 7.2
2018 Male, age 76, both hemispheres 6.5
2532 Female, age 72, left hemisphere 6.5
2245 Female, age 91, both hemispheres 6.1
1990 Female, age 91, right hemisphere 5.7
1850 Male, age 80, both hemispheres 5.3
2692 Male, age 74, both hemispheres 4.8
2693 Female, age 94, both hemispheres 4.8
1933 Female, age 85, both hemispheres 4.6
2622 Female, age 67, right hemisphere 4.2
Perirhinal gyrus
nTPM: 5.8
2848 Male, age 76, right hemisphere 7.8
1847 Female, age 91, left hemisphere 6.1
2521 Female, age 94, right hemisphere 6.1
1794 Male, age 80, right hemisphere 5.7
1841 Female, age 85, right hemisphere 4.8
2519 Male, age 75, right hemisphere 4.3
Subiculum
nTPM: 5.8
2042 Male, age 76, both hemispheres 8.4
2702 Female, age 67, right hemisphere 7.9
1901 Male, age 80, both hemispheres 5.8
2619 Male, age 74, both hemispheres 5.1
2438 Female, age 94, left hemisphere 4.9
1977 Female, age 85, both hemispheres 4.4
2729 Female, age 91, right hemisphere 4.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 179.4
Min nTPM: 0.3
Std nTPM: 30.6
Median nTPM: 19.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 179.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 159.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 145.4
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 127.7
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 123.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 120.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 114.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 106.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 91.6
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 83.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 81.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.5
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 7.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 15.2
Min nTPM: 2.2
Sample A Female 11.3
Sample B Female 14.7
Sample C Male 15.2
Sample D Male 2.2
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 14.3
Min nTPM: 5.8
Sample A Female 7.2
Sample B Female 5.8
Sample C Male 14.3
Sample D Male 10.4
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 17.8
Min nTPM: 7.7
Sample A Female 17.2
Sample B Female 12.6
Sample C Male 17.8
Sample D Male 7.7
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.2
Sample A Female 18.4
Sample B Female 12.9
Sample C Male 16.6
Sample D Male 11.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.1
Samples: 4

Max nTPM: 33.8
Min nTPM: 21.3
Sample A Male 21.3
Sample B Male 25.0
Sample C Female 24.1
Sample D Female 33.8
Hippocampal formation
nTPM: 19.4
Samples: 4

Max nTPM: 24.0
Min nTPM: 14.2
Sample A Male 24.0
Sample B Male 18.7
Sample C Female 14.2
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
1039 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 0.9
1038 Antisense, RP_Baylor_103056, Mouse strain C57BL/6J (56 days, male) 0.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.