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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:26.4 nTPM
HPA:26.4 nTPM
GTEx:33.1 nTPM
Mouse:152.9 nTPM
Allen mouse:14.2 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max nTPM 26.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 23.7
1961 Female, age 42, unknown 26.7
2226 Male, age 75, left hemisphere 20.7
Dorsomedial nucleus
nTPM: 26.4
1989 Male, age 62, unknown 36.8
2017 Female, age 42, unknown 23.0
2041 Female, age 72, unknown 19.3
Lateral hypothalamic area
nTPM: 24.2
2228 Male, age 66, unknown 33.7
1791 Male, age 80, right hemisphere 24.4
2271 Male, age 75, both hemispheres 21.1
2412 Male, age 62, unknown 17.7
Mamillary body
nTPM: 18.3
1923 Female, age 72, unknown 23.1
2413 Male, age 66, unknown 22.7
1945 Male, age 80, right hemisphere 15.7
1948 Female, age 72, unknown 15.7
1834 Female, age 42, unknown 14.4
Paraventricular nucleus
nTPM: 19.5
2700 Male, age 62, unknown 19.5
Preoptic area
nTPM: 20.7
1907 Male, age 80, right hemisphere 28.2
1861 Female, age 42, unknown 18.9
2414 Female, age 72, unknown 14.9
Supraoptic nucleus
nTPM: 15.3
1894 Female, age 72, unknown 18.2
2835 Female, age 72, unknown 16.2
2043 Male, age 62, unknown 11.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 33.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 33.1
Samples: 202

Max nTPM: 84.1
Min nTPM: 5.5
Std nTPM: 12.0
Median nTPM: 33.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 84.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 75.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 70.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 66.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 62.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 59.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 58.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 57.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 56.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 54.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 53.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 51.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 50.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 50.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 50.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 48.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 47.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 47.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 47.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 46.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 46.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 46.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 46.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 45.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 44.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 44.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 44.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 44.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 43.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 43.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 43.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 43.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 43.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 42.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 42.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 42.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 42.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 42.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 42.2
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 41.7
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 41.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 41.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 41.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 40.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 40.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 40.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 40.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 39.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 39.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 39.5
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 39.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 39.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 39.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 39.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 39.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 39.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 38.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 38.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 38.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 38.0
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 38.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 38.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 37.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 37.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 37.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 37.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 37.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 36.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 36.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 36.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 36.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 36.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 36.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 36.4
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 36.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 36.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 36.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 36.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 35.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 35.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 35.2
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 34.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 34.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 34.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 34.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 34.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 34.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 33.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 33.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 33.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 33.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 33.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 33.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 33.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 33.6
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 33.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 33.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 33.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 33.0
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 32.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 32.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 32.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 32.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 32.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 32.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 31.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 31.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 31.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 31.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 31.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 31.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 30.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 30.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 30.3
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 30.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 30.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 30.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 30.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 30.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 30.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 29.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 29.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 29.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 29.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 29.2
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 28.9
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 28.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 28.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 28.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 28.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 28.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 28.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 28.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 28.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 28.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 28.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 28.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 28.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 28.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 27.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 27.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 27.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 26.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 26.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 26.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 26.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 26.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 25.9
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 25.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 25.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 25.5
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 25.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 25.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 24.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 24.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 24.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 24.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 23.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 23.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 23.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 22.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 22.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 22.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 22.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 22.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 21.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 21.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 21.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 20.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 20.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 20.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 20.3
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 20.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 19.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 19.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 19.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 19.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 19.2
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 18.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 18.7
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 18.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 17.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 17.6
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 17.5
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 17.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 16.7
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 16.4
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 16.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 15.9
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 15.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 15.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 14.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 13.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 12.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 12.6
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 10.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 9.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 9.0
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 7.8
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 5.5
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 152.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 152.9
Samples: 4

Max nTPM: 157.6
Min nTPM: 147.6
Sample A Male 147.6
Sample B Male 157.6
Sample C Female 148.9
Sample D Female 157.3

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.2
2135 Antisense, RP_040407_02_G05, Mouse strain C57BL/6J (56 days, male) 14.2
2136 Antisense, RP_040407_02_G05, Mouse strain C57BL/6J (56 days, male) 9.5

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