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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:20.7 nTPM
HPA:20.7 nTPM
GTEx:19.9 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:6.2 nTPM
Mouse:4.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020735Antibody HPA029914
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
1898 Male, age 80, left hemisphere 19.7
2529 Female, age 94, left hemisphere 19.2
2148 Female, age 91, left hemisphere 18.8
2621 Female, age 67, right hemisphere 18.6
2860 Male, age 74, right hemisphere 18.4
1911 Female, age 85, right hemisphere 18.2
1855 Male, age 76, left hemisphere 18.0
Dentate gyrus
nTPM: 19.3
1927 Female, age 91, both hemispheres 20.1
2528 Male, age 74, both hemispheres 19.9
2531 Female, age 67, both hemispheres 19.9
2246 Female, age 85, both hemispheres 19.1
2010 Male, age 76, both hemispheres 19.0
2530 Female, age 94, left hemisphere 17.9
Entorhinal gyrus
nTPM: 19.5
1938 Female, age 85, left hemisphere 20.3
2764 Male, age 80, right hemisphere 20.3
1787 Male, age 76, left hemisphere 19.6
2117 Female, age 91, right hemisphere 19.6
2613 Female, age 94, left hemisphere 19.1
2686 Male, age 75, right hemisphere 17.9
Hippocampus, CA1
nTPM: 19.4
2749 Male, age 80, left hemisphere 20.7
2045 Male, age 76, both hemispheres 20.1
1873 Female, age 85, both hemispheres 19.6
2527 Male, age 74, both hemispheres 19.6
2082 Female, age 91, right hemisphere 19.0
2343 Female, age 94, left hemisphere 17.3
Hippocampus, CA2
nTPM: 18.8
1892 Male, age 76, both hemispheres 21.0
1963 Male, age 80, left hemisphere 20.0
1940 Female, age 85, left hemisphere 18.8
2342 Male, age 74, both hemispheres 17.7
2113 Female, age 91, right hemisphere 17.6
2437 Female, age 94, left hemisphere 17.4
Hippocampus, CA3
nTPM: 19.5
2137 Male, age 80, left hemisphere 20.9
1867 Male, age 76, both hemispheres 20.1
2436 Male, age 74, both hemispheres 19.6
1891 Female, age 85, both hemispheres 19.3
2620 Female, age 94, left hemisphere 18.9
2861 Female, age 67, both hemispheres 18.1
Parahippocampal cortex
nTPM: 19.6
1850 Male, age 80, both hemispheres 21.3
1933 Female, age 85, both hemispheres 21.3
2718 Female, age 67, right hemisphere 20.9
2245 Female, age 91, both hemispheres 20.3
2532 Female, age 72, left hemisphere 19.6
2693 Female, age 94, both hemispheres 19.6
2018 Male, age 76, both hemispheres 19.3
1990 Female, age 91, right hemisphere 18.7
2622 Female, age 67, right hemisphere 18.0
2692 Male, age 74, both hemispheres 17.5
Perirhinal gyrus
nTPM: 20.7
1847 Female, age 91, left hemisphere 23.3
1794 Male, age 80, right hemisphere 22.2
1841 Female, age 85, right hemisphere 21.8
2848 Male, age 76, right hemisphere 20.4
2521 Female, age 94, right hemisphere 18.8
2519 Male, age 75, right hemisphere 17.8
Subiculum
nTPM: 19.0
1977 Female, age 85, both hemispheres 20.4
1901 Male, age 80, both hemispheres 20.2
2702 Female, age 67, right hemisphere 20.2
2729 Female, age 91, right hemisphere 19.0
2619 Male, age 74, both hemispheres 18.9
2042 Male, age 76, both hemispheres 17.6
2438 Female, age 94, left hemisphere 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.9
Samples: 197

Max nTPM: 46.8
Min nTPM: 3.5
Std nTPM: 8.3
Median nTPM: 18.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 46.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 45.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 44.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 39.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 39.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 38.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 36.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 36.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 35.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 35.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 17.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.6
Sample A Female 7.3
Sample B Female 6.2
Sample C Male 5.6
Sample D Male 5.6
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 5.9
Min nTPM: 5.7
Sample A Female 5.9
Sample B Female 5.8
Sample C Male 5.7
Sample D Male 5.7
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 6.3
Min nTPM: 5.3
Sample A Female 5.3
Sample B Female 5.9
Sample C Male 5.9
Sample D Male 6.3
Ventral hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.4
Sample A Female 6.2
Sample B Female 5.6
Sample C Male 4.4
Sample D Male 6.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.2
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.8
Sample A Male 2.8
Sample B Male 3.3
Sample C Female 3.1
Sample D Female 3.5
Hippocampal formation
nTPM: 4.1
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.7
Sample A Male 4.3
Sample B Male 4.4
Sample C Female 4.1
Sample D Female 3.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69447894 Antisense, RP_050419_02_C08, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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