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COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
RNA expressioni
Consensus:32.2 nTPM
HPA:17.1 nTPM
GTEx:32.2 nTPM
FANTOM5:82.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043737
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Low


COLON - HPA RNA-seqi
Average nTPM 17.1
overview Male, age 54 Colon sample 67
nTPM: 16.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 15
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 17.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 19.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 11.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 12.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 20.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 19.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 15
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 18.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 21.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 16.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 17.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 32.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 25.9
Samples: 373

Max nTPM: 54.0
Min nTPM: 9.1
Std nTPM: 4.9
Median nTPM: 25.5
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 54.0
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 53.6
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 43.1
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 40.9
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 40.6
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 39.0
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 37.5
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 37.4
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 36.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 36.4
GTEX-1EH9U-1926-SM-7P8QM 60-69 years, male 36.0
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Colon - Transverse
Average nTPM: 32.2
Samples: 406

Max nTPM: 89.2
Min nTPM: 14.9
Std nTPM: 10.5
Median nTPM: 29.9
GTEX-14JIY-3326-SM-6871E 60-69 years, male 89.2
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 71.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 70.4
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 68.0
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 65.3
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 60.4
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 60.0
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 58.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 55.8
GTEX-14PK6-1726-SM-6871J 70-79 years, female 55.6
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 55.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 82.6
FF:10014-101C5 62,83,84 years, mixed 82.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.