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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:0.0 nTPM
HPA:0.0 nTPM
GTEx:21.7 nTPM
FANTOM5:15.8 Scaled Tags Per Million
Pig:37.7 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 0.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 0.0
1981 Female, age 72, midline 0.0
2048 Male, age 55, midline 0.0
2194 Female, age 79, both hemispheres 0.0
2565 Male, age 75, midline 0.0
2816 Male, age 47, midline 0.0
Cervical spinal cord, dorsal horn
nTPM: 0.0
1877 Male, age 55, unknown 0.0
2069 Male, age 47, both hemispheres 0.0
2173 Female, age 72, unknown 0.0
2296 Male, age 66, both hemispheres 0.0
2297 Male, age 75, both hemispheres 0.0
2721 Male, age 90, both hemispheres 0.0
Cervical spinal cord, ventral horn
nTPM: 0.0
2068 Male, age 55, unknown 0.0
2098 Female, age 72, unknown 0.0
2295 Male, age 66, both hemispheres 0.0
2480 Male, age 75, both hemispheres 0.0
2809 Male, age 90, both hemispheres 0.0
2820 Female, age 79, both hemispheres 0.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 21.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 21.7
Samples: 159

Max nTPM: 137.2
Min nTPM: 1.5
Std nTPM: 25.6
Median nTPM: 11.4
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 137.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 121.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 119.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 103.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 102.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 100.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 88.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 85.7
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 73.3
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 70.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 67.1
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 58.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 57.3
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 57.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 56.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 52.7
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 49.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 47.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 46.8
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 44.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 44.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 43.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 43.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 43.0
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 41.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 40.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 40.1
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 39.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 37.3
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 36.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 34.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 34.7
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 34.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 33.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 33.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 32.9
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 32.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 31.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 31.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 29.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 29.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 28.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 27.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 27.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 25.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 25.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 24.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 23.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 23.6
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 23.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 23.1
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 23.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 22.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 22.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 22.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 20.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 18.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 18.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 18.3
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 17.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 17.6
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 16.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 16.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 16.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 16.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 16.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 16.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 15.7
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 15.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 15.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 14.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 14.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 13.3
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 13.1
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 12.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 12.4
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 11.9
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 11.9
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 11.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 11.4
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 11.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 11.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 10.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 10.4
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 10.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 9.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 9.8
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 9.6
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 9.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 9.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 8.8
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 8.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 8.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 8.2
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 8.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 8.1
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 8.0
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 7.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 7.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 7.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 7.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 7.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 6.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 6.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 6.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 6.5
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 6.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 6.0
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 5.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 5.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 5.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 5.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 5.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 5.4
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 5.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 5.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 5.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 5.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 4.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 4.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 4.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 4.5
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 4.4
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 4.3
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 4.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 4.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 4.0
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 3.9
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 3.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 3.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 3.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 3.6
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 3.5
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 3.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 3.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 3.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 3.3
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 3.2
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 3.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 3.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 3.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 3.1
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 3.1
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 3.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 2.8
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 2.5
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 2.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 2.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 2.5
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 2.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 2.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 2.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 2.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 2.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 2.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1.5
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 15.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 15.8
FF:10181-103D1 60 years, female 24.8
FF:10159-103A6 76 years, female 6.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 37.7
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 37.7
Samples: 4

Max nTPM: 75.9
Min nTPM: 6.3
Sample A Female 75.9
Sample B Female 15.8
Sample C Male 6.3
Sample D Male 52.9
Ventral spinal cord
nTPM: 29.2
Samples: 4

Max nTPM: 39.1
Min nTPM: 13.3
Sample A Female 39.1
Sample B Female 27.0
Sample C Male 37.4
Sample D Male 13.3

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