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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:146.4 nTPM
HPA:146.4 nTPM
GTEx:75.0 nTPM
FANTOM5:288.3 Scaled Tags Per Million
Pig:46.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 146.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 141.7
2048 Male, age 55, midline 161.3
1981 Female, age 72, midline 152.2
2816 Male, age 47, midline 137.8
2565 Male, age 75, midline 129.3
2194 Female, age 79, both hemispheres 127.8
Cervical spinal cord, dorsal horn
nTPM: 146.4
2721 Male, age 90, both hemispheres 192.0
2173 Female, age 72, unknown 146.7
2296 Male, age 66, both hemispheres 139.8
2069 Male, age 47, both hemispheres 135.4
1877 Male, age 55, unknown 134.2
2297 Male, age 75, both hemispheres 130.0
Cervical spinal cord, ventral horn
nTPM: 128.2
2098 Female, age 72, unknown 156.8
2809 Male, age 90, both hemispheres 130.6
2295 Male, age 66, both hemispheres 125.8
2820 Female, age 79, both hemispheres 119.1
2480 Male, age 75, both hemispheres 118.9
2068 Male, age 55, unknown 118.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 75.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 75.0
Samples: 159

Max nTPM: 399.7
Min nTPM: 11.2
Std nTPM: 70.2
Median nTPM: 57.3
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 399.7
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 399.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 367.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 363.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 337.2
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 325.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 267.7
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 205.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 176.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 159.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 149.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 145.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 142.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 142.7
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 138.7
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 131.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 130.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 129.1
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 126.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 126.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 124.1
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 121.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 121.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 121.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 120.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 113.8
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 110.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 110.2
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 105.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 103.9
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 99.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 98.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 97.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 97.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 93.9
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 93.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 91.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 88.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 87.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 87.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 86.1
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 82.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 82.3
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 82.0
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 79.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 77.9
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 77.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 77.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 76.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 74.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 73.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 72.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 71.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 71.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 71.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 70.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 69.0
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 68.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 66.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 65.9
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 65.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 65.5
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 64.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 64.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 64.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 63.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 63.4
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 63.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 61.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 60.8
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 60.5
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 59.8
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 59.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 59.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 59.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 59.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 58.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 57.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 57.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 57.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 56.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 56.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 56.2
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 55.6
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 54.5
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 53.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 53.6
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 53.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 50.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 50.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 50.2
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 49.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 49.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 46.9
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 46.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 46.0
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 45.7
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 44.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 43.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 43.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 43.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 43.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 42.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 42.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 41.3
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 40.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 39.2
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 39.0
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 38.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 38.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 37.6
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 37.3
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 37.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 36.5
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 36.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 36.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 35.7
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 35.5
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 35.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 35.2
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 35.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 34.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 34.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 34.0
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 33.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 33.3
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 33.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 32.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 31.4
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 31.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 31.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 30.1
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 30.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 29.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 29.8
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 29.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 28.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 28.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 28.2
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 27.7
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 27.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 26.4
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 24.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 23.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 23.4
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 22.4
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 22.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 21.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 19.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 17.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 15.6
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 15.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 14.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 13.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 13.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 12.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 11.8
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 11.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 11.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 288.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 288.3
FF:10159-103A6 76 years, female 365.4
FF:10181-103D1 60 years, female 211.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 46.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 37.8
Samples: 4

Max nTPM: 45.8
Min nTPM: 30.4
Sample A Female 30.4
Sample B Female 45.8
Sample C Male 41.0
Sample D Male 33.8
Ventral spinal cord
nTPM: 46.4
Samples: 4

Max nTPM: 51.1
Min nTPM: 40.0
Sample A Female 44.3
Sample B Female 50.0
Sample C Male 51.1
Sample D Male 40.0

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