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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:5.3 nTPM
FANTOM5:5.4 Scaled Tags Per Million
Pig:4.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040797
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 5.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 5.3
Samples: 246

Max nTPM: 9.4
Min nTPM: 1.9
Std nTPM: 1.3
Median nTPM: 5.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 9.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 8.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 7.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 7.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 7.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 7.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 7.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 7.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 7.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 7.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 7.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 7.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 7.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 7.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 7.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 7.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 7.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 7.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 7.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 7.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 7.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 7.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 6.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 6.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 6.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 6.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 6.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 6.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 6.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 6.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 6.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 6.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 6.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 6.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 6.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 6.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 6.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 6.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 6.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 6.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 6.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 6.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 6.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 6.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 6.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 6.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 6.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 6.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 6.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 6.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 6.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 6.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 6.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 6.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 6.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 6.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 6.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 6.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 6.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 6.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 6.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 6.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 6.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 6.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 6.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 6.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 6.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 6.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 6.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 6.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 6.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 6.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 6.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 6.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 6.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 6.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 6.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 6.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 5.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 5.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 5.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 5.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 5.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 5.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 5.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 5.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 5.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 5.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 5.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 5.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 5.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 5.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 5.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 5.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 5.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 5.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 5.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 5.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 5.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 5.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 5.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 5.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 5.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 5.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 5.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 5.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 5.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 5.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 5.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 5.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 5.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 5.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 5.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 5.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 5.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 5.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 5.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 5.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 5.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 5.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 5.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 5.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 5.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 5.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 5.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 5.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 5.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 5.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 5.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 5.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 5.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 5.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 5.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 5.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 5.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 5.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 5.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 5.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 5.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 5.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 5.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 5.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 4.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 4.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 4.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 4.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 4.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 4.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 4.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 4.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 4.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 4.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 4.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 4.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 4.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 4.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 4.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 4.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 4.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 4.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 4.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 4.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 4.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 4.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 4.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 4.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 4.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 4.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 4.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 4.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 4.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 4.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 4.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 4.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 4.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 4.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 4.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 4.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 4.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 4.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 4.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 4.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 4.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 3.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 3.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 3.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 3.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 3.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 3.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 3.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 3.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 3.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 3.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 3.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 3.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 3.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 3.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 3.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 3.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 3.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 3.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 3.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 3.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 3.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 3.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 3.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 3.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 3.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 3.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 3.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 3.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 3.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 3.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 3.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 3.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 3.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 3.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 2.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 2.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 2.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 5.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 5.4
FF:10164-103B2 76 years, female 5.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 4.9
Pig sample Sample description nTPM
Caudate
nTPM: 4.9
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 5.3
Sample C Male 5.2
Sample D Male 5.2

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