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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:29.1 nTPM
FANTOM5:37.8 Scaled Tags Per Million
Pig:18.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA005992
Glial cells Medium
Neuronal cells High


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 29.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 29.1
Samples: 246

Max nTPM: 53.6
Min nTPM: 11.6
Std nTPM: 5.8
Median nTPM: 28.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 53.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 47.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 47.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 44.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 43.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 43.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 39.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 39.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 39.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 39.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 38.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 38.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 38.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 37.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 37.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 37.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 37.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 37.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 37.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 37.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 36.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 36.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 36.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 36.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 36.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 36.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 36.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 35.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 35.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 35.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 35.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 35.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 35.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 34.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 34.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 34.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 34.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 34.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 34.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 34.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 34.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 34.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 34.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 34.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 33.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 33.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 33.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 33.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 33.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 33.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 32.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 32.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 32.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 32.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 32.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 32.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 32.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 32.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 32.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 32.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 32.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 32.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 32.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 32.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 32.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 32.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 31.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 31.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 31.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 31.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 31.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 31.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 31.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 31.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 31.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 31.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 31.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 31.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 31.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 31.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 31.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 31.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 31.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 30.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 30.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 30.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 30.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 30.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 30.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 30.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 30.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 30.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 30.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 30.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 30.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 29.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 29.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 29.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 29.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 29.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 29.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 29.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 29.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 29.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 29.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 29.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 29.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 29.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 29.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 29.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 28.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 28.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 28.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 28.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 28.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 28.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 28.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 28.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 28.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 28.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 28.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 28.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 28.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 28.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 28.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 28.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 28.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 28.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 28.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 28.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 28.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 28.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 28.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 28.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 28.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 28.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 27.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 27.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 27.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 27.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 27.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 27.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 27.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 27.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 27.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 27.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 27.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 27.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 27.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 27.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 27.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 26.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 26.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 26.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 26.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 26.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 26.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 26.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 26.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 26.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 26.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 26.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 26.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 26.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 26.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 26.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 26.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 26.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 25.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 25.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 25.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 25.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 25.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 25.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 25.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 25.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 25.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 25.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 25.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 25.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 25.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 24.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 24.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 24.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 24.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 24.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 24.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 24.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 24.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 24.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 24.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 24.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 24.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 23.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 23.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 23.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 23.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 23.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 23.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 23.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 23.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 22.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 22.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 22.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 22.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 22.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 22.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 22.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 22.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 22.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 22.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 21.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 21.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 21.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 21.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 21.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 21.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 20.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 20.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 20.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 20.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 20.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 19.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 18.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 18.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 17.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 16.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 16.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 16.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 15.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 14.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 11.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 37.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 37.8
FF:10164-103B2 76 years, female 37.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 18.5
Pig sample Sample description nTPM
Caudate
nTPM: 18.6
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.1
Sample A Female 17.7
Sample B Female 19.3
Sample C Male 21.1
Sample D Male 16.1

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