COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.2 nTPM
HPA:8.2 nTPM
GTEx:4.3 nTPM
FANTOM5:5.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA045704Antibody HPA049497Antibody HPA051675
Endothelial cells Not detectedNot detectedMedium
Glandular cells LowNot detectedMedium
Peripheral nerve/ganglion Not detectedNot detected-






COLON - HPA RNA-seqi
Average nTPM 8.2
overview
Male, age 54 		Colon sample 67
nTPM: 11.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 8.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 9.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 5.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 6.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 6.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 12.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 8.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 5.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 7.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 9.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 4.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 4.3
Samples: 373

Max nTPM: 15.4
Min nTPM: 0.2
Std nTPM: 1.8
Median nTPM: 4.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 15.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 10.5
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 10.4
GTEX-1JJE9-2526-SM-ARU8K 70-79 years, male 9.0
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 8.7
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 8.7
GTEX-15UF7-1326-SM-7KUKV 40-49 years, male 8.6
GTEX-1H1DE-1626-SM-9KNU5 20-29 years, male 8.5
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 8.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 8.2
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 8.1
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Colon - Transverse
Average nTPM: 3.5
Samples: 406

Max nTPM: 11.7
Min nTPM: 0.0
Std nTPM: 1.7
Median nTPM: 3.2
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 11.7
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 11.0
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 10.9
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 8.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 8.6
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 8.6
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 7.8
GTEX-1N5O9-2726-SM-E76QH 60-69 years, male 7.8
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 7.5
GTEX-14ICK-1026-SM-6AJA4 40-49 years, male 7.4
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 7.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 5.5
FF:10014-101C5 62,83,84 years, mixed 5.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.