Tissue expression of RGPD5 - Staining in colon

COLON - Expression summary

RNA expressionⁱ

HPA:	1.3	TPM
GTEx:	0.1	RPKM
FANTOM5:	3.0	Tags Per Million

COLON - Annotated protein expressionⁱ

Antibody stainingⁱ This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells. Read more	Antibody HPA045704	Antibody HPA049497	Antibody HPA051675
Endothelial cells	Not detected	Not detected	Medium
Glandular cells	Low	Not detected	Medium
Peripheral nerve/ganglion	Not detected	Not detected

COLON - HPA RNA-seqⁱ

Average TPM	1.3

Male, age 54

Sample 1
TPM: 8.1

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 1.4

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 1.5

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 1.2

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 0.4

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 0.4

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 0.1

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 0.0

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 0.6

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 0.1

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 0.8

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 1.7

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 0.2

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqⁱ

Average RPKM	0.1

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.1

Samples: 149

Max RPKM: 0.2
Min RPKM: 0
Std RPKM: 0
Median RPKM: 0.1

GTEX-13X6I-2726-SM-5Q5ET

0.2

GTEX-14E6C-2226-SM-5QGQG

0.2

GTEX-ZLFU-1426-SM-4WWEU

0.1

GTEX-111CU-1226-SM-5EGIN

0.1

GTEX-13OW8-2726-SM-5L3FZ

0.1

GTEX-ZVT4-2626-SM-5N9GJ

0.1

GTEX-145MO-2626-SM-5QGPD

0.1

GTEX-Y114-1626-SM-4TT7I

0.1

Show all

Colon - Transverse

Colon - Transverse
RPKM: 0.1

Samples: 196

Max RPKM: 0.2
Min RPKM: 0
Std RPKM: 0
Median RPKM: 0.1

GTEX-TML8-1326-SM-4DXTO

0.2

GTEX-X5EB-0926-SM-46MVT

0.2

GTEX-13OVG-1426-SM-5K7VP

0.2

GTEX-148VJ-2626-SM-5QGPI

0.2

GTEX-TKQ2-1326-SM-4DXT9

0.1

GTEX-ZYFG-1926-SM-5GID5

0.1

GTEX-111CU-1426-SM-5GZYP

0.1

GTEX-WFG7-1526-SM-4LVMG

0.1

Show all

COLON - FANTOM5 CAGEⁱ

Average Tags Per Million	3.0

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 3.0

FF:10014-101C5

62,83,84 years, mixed

3.0