We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
STMN4
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • STMN4
TISSUE MEDULLA OBLONGATA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
Dictionary
Tissue proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:185.1 nTPM
HPA:185.1 nTPM
FANTOM5:74.9 Scaled Tags Per Million
Pig:253.9 nTPM
Allen mouse:5.0 Expression energy

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 185.1
Sample id Sample description nTPM
Area postrema
nTPM: 114.1
2306 Male, age 80, both hemispheres 141.3
2054 Male, age 76, both hemispheres 108.2
2799 Male, age 61, both hemispheres 92.7
Cuneate nuclei
nTPM: 149.2
2381 Male, age 80, both hemispheres 166.6
2376 Male, age 61, both hemispheres 149.3
2131 Male, age 76, both hemispheres 131.5
Dorsal medullary reticular nucleus
nTPM: 141.0
2373 Male, age 61, both hemispheres 142.2
2088 Male, age 76, both hemispheres 140.8
2040 Female, age 85, both hemispheres 139.9
Dorsal motor vagal complex
nTPM: 119.9
2185 Male, age 76, both hemispheres 143.5
2133 Female, age 91, both hemispheres 128.0
2844 Male, age 55, unknown 120.8
2000 Male, age 74, unknown 120.4
2643 Male, age 74, both hemispheres 118.9
2807 Female, age 85, both hemispheres 116.4
2813 Female, age 72, unknown 110.5
2797 Male, age 61, both hemispheres 100.5
Gigantocellular reticular nuclei, medullary
nTPM: 150.6
2314 Male, age 61, both hemispheres 200.3
2387 Female, age 91, both hemispheres 163.7
1876 Female, age 85, both hemispheres 153.2
2310 Male, age 80, both hemispheres 136.4
2022 Male, age 76, right hemisphere 129.4
2462 Male, age 74, both hemispheres 120.7
Gigantocellular reticular nuclei, pars
nTPM: 138.7
2336 Male, age 61, both hemispheres 146.3
2330 Male, age 80, both hemispheres 142.6
2706 Male, age 80, both hemispheres 140.6
2084 Female, age 85, both hemispheres 137.9
2168 Male, age 76, both hemispheres 126.3
Inferior olive
nTPM: 160.2
2563 Male, age 74, both hemispheres 178.4
2178 Male, age 61, both hemispheres 174.8
2628 Female, age 91, both hemispheres 165.7
2085 Female, age 85, both hemispheres 144.6
2379 Male, age 80, both hemispheres 137.5
Lateral medullary reticular nucleus
nTPM: 170.3
2305 Male, age 74, both hemispheres 219.0
2852 Male, age 80, both hemispheres 180.0
2374 Male, age 61, both hemispheres 171.9
2190 Female, age 85, both hemispheres 152.4
2804 Female, age 91, both hemispheres 151.0
2044 Male, age 76, both hemispheres 147.7
Medial vestibular nucleus
nTPM: 145.1
2801 Male, age 74, both hemispheres 186.3
2803 Female, age 91, both hemispheres 165.6
2093 Male, age 80, both hemispheres 152.3
2624 Male, age 61, both hemispheres 141.3
2743 Female, age 85, both hemispheres 121.0
2134 Male, age 76, both hemispheres 104.3
Motor hypoglossal nucleus
nTPM: 145.6
2125 Female, age 91, both hemispheres 170.0
2182 Male, age 80, both hemispheres 170.0
2132 Female, age 85, both hemispheres 164.8
2461 Male, age 61, both hemispheres 124.2
2277 Male, age 76, both hemispheres 99.2
Nucleus ambiguus
nTPM: 179.8
2071 Male, age 76, both hemispheres 199.5
2096 Female, age 85, both hemispheres 160.0
Nucleus cuneatus
nTPM: 148.1
2380 Male, age 80, both hemispheres 166.9
2100 Male, age 76, both hemispheres 164.3
2808 Female, age 85, both hemispheres 160.8
2564 Male, age 74, both hemispheres 154.7
2805 Female, age 91, both hemispheres 130.3
2562 Male, age 61, both hemispheres 111.4
Nucleus gracilis
nTPM: 157.4
2382 Male, age 80, both hemispheres 184.3
2627 Male, age 74, both hemispheres 165.2
2299 Female, age 85, both hemispheres 122.8
Nucleus raphe magnus
nTPM: 138.3
2455 Male, age 74, both hemispheres 157.0
2459 Female, age 91, both hemispheres 155.3
2051 Male, age 76, both hemispheres 143.3
2328 Male, age 80, both hemispheres 138.0
2160 Male, age 61, both hemispheres 129.6
2172 Female, age 85, both hemispheres 106.8
Nucleus raphe obscurus
nTPM: 185.1
2142 Male, age 76, midline 191.6
2845 Female, age 85, midline 186.4
2800 Male, age 61, midline 177.3
Nucleus raphe pallidus
nTPM: 183.7
2145 Male, age 76, midline 219.6
1924 Male, age 61, midline 176.3
2183 Male, age 80, midline 155.2
Nucleus tractus solitarii
nTPM: 102.1
2307 Male, age 80, both hemispheres 107.7
2656 Male, age 76, both hemispheres 105.0
2191 Female, age 85, both hemispheres 100.8
2144 Female, age 91, right hemisphere 94.7
Parvicellular reticular nuclei
nTPM: 149.8
2095 Male, age 76, both hemispheres 159.1
2119 Male, age 80, both hemispheres 154.6
2558 Male, age 74, both hemispheres 135.7
Parvicellular reticular nuclei, medullary
nTPM: 136.9
2189 Female, age 91, both hemispheres 154.1
2181 Male, age 80, left hemisphere 128.8
2091 Female, age 85, both hemispheres 127.8
Peritrigeminal nucleus
nTPM: 156.6
2136 Male, age 76, both hemispheres 162.5
2179 Male, age 61, both hemispheres 160.7
2067 Female, age 85, both hemispheres 146.5
Prepositus hypoglossal nucleus
nTPM: 130.6
2855 Female, age 85, right hemisphere 152.0
2086 Male, age 80, both hemispheres 109.1
Spinal trigeminal nucleus, caudal
nTPM: 154.6
2312 Male, age 61, both hemispheres 175.4
2308 Male, age 80, both hemispheres 152.7
2447 Male, age 76, both hemispheres 149.7
2642 Male, age 74, both hemispheres 149.4
2390 Female, age 91, both hemispheres 146.1
Spinal trigeminal nucleus, interpolar
nTPM: 131.8
2389 Female, age 91, both hemispheres 143.1
2386 Female, age 85, both hemispheres 137.7
2033 Male, age 80, both hemispheres 132.9
2066 Male, age 76, right hemisphere 129.8
2625 Male, age 61, both hemispheres 115.6
Spinal vestibular nucleus
nTPM: 148.9
2748 Male, age 76, both hemispheres 171.3
2384 Male, age 74, both hemispheres 157.8
2186 Female, age 91, both hemispheres 155.4
2806 Female, age 85, both hemispheres 146.4
2780 Male, age 80, both hemispheres 141.0
2796 Male, age 61, both hemispheres 121.6
Ventral medullary reticular nucleus
nTPM: 161.6
2060 Male, age 76, both hemispheres 166.4
2372 Male, age 61, both hemispheres 156.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 154.1
2118 Male, age 80, both hemispheres 169.5
2180 Male, age 61, both hemispheres 166.1
1986 Male, age 76, both hemispheres 151.8
2302 Female, age 91, both hemispheres 146.6
2741 Female, age 85, both hemispheres 136.5

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 74.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 74.9
FF:10038-101F2 18-64 years, mixed 145.4
FF:10155-103A2 76 years, female 41.7
FF:10174-103C3 60 years, female 37.6

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 253.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 253.9
Samples: 4

Max nTPM: 288.7
Min nTPM: 179.4
Sample A Female 276.5
Sample B Female 179.4
Sample C Male 271.1
Sample D Male 288.7

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.0
1007 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 8.2
1006 Antisense, RP_Baylor_103218, Mouse strain C57BL/6J (56 days, male) 7.7
1008 Sense, RPS_Baylor_37084, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.