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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
337.3
nTPM
HPA Brain:
735.7
nTPM
GTEx:
337.3
nTPM
FANTOM5:
536.3
Scaled Tags Per Million
Pig:
757.5
nTPM
Mouse:
604.3
nTPM
Allen mouse:
11.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
735.7
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 495.6
2586
Male, age 75, left hemisphere
736.9
2828
Female, age 72, unknown
716.0
2666
Male, age 74, left hemisphere
529.6
1827
Male, age 72, unknown
490.5
1833
Male, age 53, unknown
483.9
2411
Female, age 72, unknown
430.8
1870
Female, age 42, unknown
424.7
1830
Male, age 51, unknown
420.1
2219
Male, age 76, both hemispheres
373.3
2019
Male, age 18, unknown
350.3
Dorsal raphe nucleus nTPM: 600.9
1828
Male, age 53, unknown
743.3
2047
Male, age 72, unknown
695.2
2016
Female, age 72, unknown
611.0
2298
Female, age 72, unknown
516.4
2750
Male, age 76, both hemispheres
438.9
Inferior colliculus nTPM: 735.7
1848
Female, age 42, unknown
779.8
1890
Male, age 53, unknown
726.5
2849
Male, age 72, unknown
721.6
2097
Female, age 72, unknown
715.0
Median raphe nucleus nTPM: 394.5
2220
Male, age 76, midline
394.5
Periaquaductal grey, anterior nTPM: 561.2
2502
Female, age 75, unknown
595.6
1947
Male, age 18, unknown
580.9
1795
Male, age 51, unknown
506.9
Periaquaductal grey, dorsal nTPM: 577.2
1840
Male, age 53, unknown
651.6
2464
Female, age 72, unknown
627.8
2850
Male, age 76, both hemispheres
585.3
1831
Male, age 72, unknown
444.2
Periaquaductal grey, lateral nTPM: 498.2
2053
Male, age 18, unknown
608.9
2140
Male, age 76, both hemispheres
598.7
2272
Male, age 74, both hemispheres
287.0
Pretectal area nTPM: 530.7
1817
Female, age 42, unknown
739.6
2667
Female, age 75, unknown
695.7
1816
Male, age 51, unknown
612.0
2825
Male, age 18, unknown
607.0
1944
Female, age 72, unknown
595.8
1815
Male, age 53, unknown
511.1
2316
Male, age 76, right hemisphere
456.4
2224
Female, age 72, unknown
453.9
2007
Male, age 72, unknown
419.8
2407
Male, age 75, both hemispheres
377.2
2273
Male, age 74, both hemispheres
368.8
Red nucleus nTPM: 640.6
1821
Female, age 72, unknown
776.2
1954
Female, age 42, unknown
763.9
2503
Female, age 72, unknown
757.0
2588
Male, age 74, left hemisphere
747.5
2823
Male, age 76, right hemisphere
725.6
2227
Male, age 72, unknown
704.8
2769
Male, age 72, unknown
703.0
2725
Female, age 75, unknown
599.0
1865
Male, age 51, unknown
594.7
1904
Male, age 53, unknown
594.1
2584
Male, age 75, left hemisphere
382.7
2785
Male, age 18, unknown
338.7
Substantia nigra nTPM: 564.3
2699
Male, age 18, unknown
811.9
1916
Female, age 42, unknown
650.3
1889
Female, age 72, unknown
602.7
2665
Male, age 74, both hemispheres
601.1
2241
Male, age 72, unknown
598.7
1851
Male, age 51, unknown
544.1
2409
Female, age 72, unknown
526.7
2583
Male, age 75, right hemisphere
446.3
1941
Male, age 53, unknown
434.5
2590
Female, age 75, unknown
426.8
Superior colliculus nTPM: 518.8
2664
Male, age 75, both hemispheres
690.3
2087
Female, age 72, unknown
615.2
1839
Male, age 51, unknown
570.6
2261
Male, age 18, unknown
558.5
1796
Male, age 53, unknown
497.2
1995
Male, age 72, unknown
495.6
2668
Female, age 75, unknown
480.9
1895
Male, age 76, right hemisphere
461.2
2587
Male, age 74, left hemisphere
444.4
1913
Female, age 42, unknown
374.2
Ventral tegmental area nTPM: 471.0
2410
Female, age 72, unknown
559.3
1915
Female, age 42, unknown
480.8
1942
Male, age 51, unknown
477.7
2218
Male, age 76, both hemispheres
455.7
2021
Male, age 53, unknown
455.4
2223
Female, age 72, unknown
397.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
337.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 337.3
Samples: 139
Max nTPM: 1435.9
Min nTPM: 58.9
Std nTPM: 205.8
Median nTPM: 292.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1435.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
1164.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
840.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
784.1
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
765.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
729.9
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
727.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
672.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
662.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
650.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
627.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
606.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
605.8
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
592.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
569.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
555.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
553.1
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
545.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
529.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
521.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
519.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
497.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
491.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
487.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
486.7
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
485.4
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
479.8
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
469.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
465.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
461.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
451.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
448.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
447.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
431.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
427.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
426.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
423.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
420.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
418.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
413.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
412.5
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
403.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
398.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
398.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
396.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
393.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
393.8
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
391.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
390.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
386.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
383.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
379.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
376.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
375.5
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
368.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
367.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
365.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
341.7
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
338.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
326.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
315.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
313.7
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
312.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
303.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
300.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
299.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
295.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
294.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
293.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
292.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
291.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
291.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
289.3
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
288.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
285.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
283.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
282.2
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
278.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
268.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
265.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
263.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
261.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
261.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
259.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
257.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
253.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
253.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
250.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
250.3
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
243.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
243.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
235.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
222.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
219.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
212.8
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
212.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
211.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
202.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
200.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
198.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
193.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
189.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
189.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
182.9
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
176.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
174.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
170.0
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
169.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
168.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
167.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
166.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
164.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
164.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
162.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
157.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
155.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
154.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
153.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
147.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
147.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
145.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
142.7
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
141.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
139.3
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
138.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
132.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
129.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
128.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
111.6
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
108.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
105.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
103.2
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
101.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
97.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
89.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
81.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
75.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
66.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
58.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
604.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 604.3
Samples: 4
Max nTPM: 645.7
Min nTPM: 562.0
Sample A
Male
582.4
Sample B
Male
562.0
Sample C
Female
627.1
Sample D
Female
645.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.