HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:16.8 nTPM
HPA Brain:37.0 nTPM
GTEx:16.8 nTPM
FANTOM5:14.1 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:7.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043061Antibody HPA065309
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.0
Sample id Sample description nTPM
Hippocampus
nTPM: 34.6
2529 Female, age 94, left hemisphere 47.3
2621 Female, age 67, right hemisphere 37.3
2148 Female, age 91, left hemisphere 32.1
1898 Male, age 80, left hemisphere 31.7
1855 Male, age 76, left hemisphere 30.3
1911 Female, age 85, right hemisphere 28.7
Dentate gyrus
nTPM: 37.0
2530 Female, age 94, left hemisphere 55.7
2010 Male, age 76, both hemispheres 41.4
2531 Female, age 67, both hemispheres 36.3
2246 Female, age 85, both hemispheres 35.6
2528 Male, age 74, both hemispheres 28.5
1927 Female, age 91, both hemispheres 24.3
Entorhinal gyrus
nTPM: 28.7
2686 Male, age 75, right hemisphere 40.1
1787 Male, age 76, left hemisphere 33.8
2117 Female, age 91, right hemisphere 30.9
1938 Female, age 85, left hemisphere 24.1
2764 Male, age 80, right hemisphere 22.8
2613 Female, age 94, left hemisphere 20.3
Hippocampus, CA1
nTPM: 30.2
2082 Female, age 91, right hemisphere 33.6
2527 Male, age 74, both hemispheres 31.8
2045 Male, age 76, both hemispheres 30.7
2749 Male, age 80, left hemisphere 29.5
1873 Female, age 85, both hemispheres 25.6
Hippocampus, CA2
nTPM: 33.0
1940 Female, age 85, left hemisphere 42.8
2437 Female, age 94, left hemisphere 39.3
2113 Female, age 91, right hemisphere 32.4
2249 Male, age 74, both hemispheres 30.5
1963 Male, age 80, left hemisphere 27.8
1892 Male, age 76, both hemispheres 24.9
Hippocampus, CA3
nTPM: 29.9
2861 Female, age 67, both hemispheres 36.3
1867 Male, age 76, both hemispheres 32.2
2620 Female, age 94, left hemisphere 30.7
1891 Female, age 85, both hemispheres 29.1
2137 Male, age 80, left hemisphere 27.2
2436 Male, age 74, both hemispheres 23.5
Parahippocampal cortex
nTPM: 28.2
2250 Female, age 67, right hemisphere 35.6
2018 Male, age 76, both hemispheres 35.2
2245 Female, age 91, both hemispheres 31.9
2692 Male, age 74, both hemispheres 31.4
2532 Female, age 72, left hemisphere 30.0
1933 Female, age 85, both hemispheres 27.5
1990 Female, age 91, right hemisphere 25.3
2622 Female, age 67, right hemisphere 23.2
2693 Female, age 94, both hemispheres 21.3
1850 Male, age 80, both hemispheres 21.0
Perirhinal gyrus
nTPM: 24.2
1841 Female, age 85, right hemisphere 27.7
2848 Male, age 76, right hemisphere 25.1
2521 Female, age 94, right hemisphere 24.6
1847 Female, age 91, left hemisphere 22.5
1794 Male, age 80, right hemisphere 21.3
Subiculum
nTPM: 31.4
2042 Male, age 76, both hemispheres 39.6
2438 Female, age 94, left hemisphere 31.9
2729 Female, age 91, right hemisphere 31.2
1901 Male, age 80, both hemispheres 30.1
1977 Female, age 85, both hemispheres 28.8
2619 Male, age 74, both hemispheres 26.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 54.5
Min nTPM: 5.2
Std nTPM: 8.2
Median nTPM: 14.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 54.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 51.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 48.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 44.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 36.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 35.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 35.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 33.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 33.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 32.8
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 32.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.1
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 11.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.6
Sample A Female 19.6
Sample B Female 15.6
Sample C Male 16.5
Sample D Male 18.1
Dorsal hippocampus
nTPM: 16.8
Samples: 4

Max nTPM: 22.4
Min nTPM: 10.9
Sample A Female 19.5
Sample B Female 14.4
Sample C Male 22.4
Sample D Male 10.9
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.5
Sample A Female 19.9
Sample B Female 16.5
Sample C Male 17.9
Sample D Male 17.4
Ventral hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 20.3
Min nTPM: 13.6
Sample A Female 13.6
Sample B Female 13.8
Sample C Male 20.3
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.7
Sample A Male 8.2
Sample B Male 8.0
Sample C Female 6.7
Sample D Female 7.6
Hippocampal formation
nTPM: 5.5
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.9
Sample A Male 5.7
Sample B Male 6.0
Sample C Female 5.2
Sample D Female 4.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69114866 Antisense, RP_050317_02_C01, Mouse strain C57BL/6J (56 days, male) 0.3
70918892 Antisense, RP_050712_04_G02, Mouse strain C57BL/6J (56 days, male) 0.0

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