We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
194.1
nTPM
HPA Brain:
202.3
nTPM
GTEx:
194.1
nTPM
FANTOM5:
613.2
Scaled Tags Per Million
Pig:
668.4
nTPM
Mouse:
27.0
nTPM
Allen mouse:
2.5
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
202.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 77.2
2019
Male, age 18, unknown
127.9
1870
Female, age 42, unknown
99.4
2666
Male, age 74, left hemisphere
96.5
2828
Female, age 72, unknown
86.8
1830
Male, age 51, unknown
84.9
1833
Male, age 53, unknown
83.8
2411
Female, age 72, unknown
59.4
1827
Male, age 72, unknown
54.9
2219
Male, age 76, both hemispheres
40.5
2586
Male, age 75, left hemisphere
37.9
Dorsal raphe nucleus nTPM: 165.0
2016
Female, age 72, unknown
279.3
2298
Female, age 72, unknown
214.5
1828
Male, age 53, unknown
152.8
2047
Male, age 72, unknown
101.8
2750
Male, age 76, both hemispheres
76.8
Inferior colliculus nTPM: 84.4
1890
Male, age 53, unknown
137.7
2097
Female, age 72, unknown
76.4
2849
Male, age 72, unknown
61.9
1848
Female, age 42, unknown
61.5
Median raphe nucleus nTPM: 82.7
2220
Male, age 76, midline
82.7
Periaquaductal grey, anterior nTPM: 138.3
1795
Male, age 51, unknown
215.3
2502
Female, age 75, unknown
112.4
1947
Male, age 18, unknown
87.0
Periaquaductal grey, dorsal nTPM: 167.5
2850
Male, age 76, both hemispheres
307.2
1831
Male, age 72, unknown
197.0
1840
Male, age 53, unknown
86.1
2464
Female, age 72, unknown
79.6
Periaquaductal grey, lateral nTPM: 202.3
2272
Male, age 74, both hemispheres
276.7
2140
Male, age 76, both hemispheres
207.7
2053
Male, age 18, unknown
122.5
Pretectal area nTPM: 96.0
2273
Male, age 74, both hemispheres
251.5
2224
Female, age 72, unknown
125.8
2316
Male, age 76, right hemisphere
99.1
2825
Male, age 18, unknown
89.7
1817
Female, age 42, unknown
81.5
1815
Male, age 53, unknown
76.7
2667
Female, age 75, unknown
71.5
2407
Male, age 75, both hemispheres
71.3
2007
Male, age 72, unknown
64.5
1816
Male, age 51, unknown
62.4
1944
Female, age 72, unknown
62.3
Red nucleus nTPM: 108.4
2785
Male, age 18, unknown
131.3
2725
Female, age 75, unknown
121.9
2769
Male, age 72, unknown
118.7
2227
Male, age 72, unknown
117.7
1821
Female, age 72, unknown
113.9
1904
Male, age 53, unknown
112.7
2584
Male, age 75, left hemisphere
111.5
1954
Female, age 42, unknown
109.7
1865
Male, age 51, unknown
107.4
2503
Female, age 72, unknown
91.6
2588
Male, age 74, left hemisphere
83.5
2823
Male, age 76, right hemisphere
80.9
Substantia nigra nTPM: 101.1
2590
Female, age 75, unknown
145.2
2665
Male, age 74, both hemispheres
137.8
2699
Male, age 18, unknown
130.6
1851
Male, age 51, unknown
125.5
2583
Male, age 75, right hemisphere
101.9
2409
Female, age 72, unknown
82.9
1941
Male, age 53, unknown
79.5
1916
Female, age 42, unknown
74.7
2241
Male, age 72, unknown
68.6
1889
Female, age 72, unknown
64.5
Superior colliculus nTPM: 116.7
1995
Male, age 72, unknown
287.0
1913
Female, age 42, unknown
181.6
2587
Male, age 74, left hemisphere
139.6
2087
Female, age 72, unknown
108.8
2668
Female, age 75, unknown
84.2
1796
Male, age 53, unknown
84.1
2664
Male, age 75, both hemispheres
80.0
2261
Male, age 18, unknown
79.2
1839
Male, age 51, unknown
68.7
1895
Male, age 76, right hemisphere
53.8
Ventral tegmental area nTPM: 126.8
1915
Female, age 42, unknown
171.4
2223
Female, age 72, unknown
165.3
2021
Male, age 53, unknown
156.4
1942
Male, age 51, unknown
98.6
2218
Male, age 76, both hemispheres
90.0
2410
Female, age 72, unknown
78.8
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
194.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 194.1
Samples: 139
Max nTPM: 1102.3
Min nTPM: 57.3
Std nTPM: 143.2
Median nTPM: 158.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
1102.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
777.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
725.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
711.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
573.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
495.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
380.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
368.8
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
340.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
330.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
323.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
322.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
318.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
317.4
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
317.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
316.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
313.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
312.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
310.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
309.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
306.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
290.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
289.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
287.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
284.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
275.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
268.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
261.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
260.0
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
256.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
247.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
241.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
241.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
237.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
237.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
233.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
233.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
217.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
214.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
214.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
209.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
206.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
199.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
199.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
197.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
192.4
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
192.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
188.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
187.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
184.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
183.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
180.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
180.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
179.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
179.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
179.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
178.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
175.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
169.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
169.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
169.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
165.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
165.1
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
164.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
162.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
159.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
159.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
159.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
158.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
158.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
158.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
156.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
155.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
153.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
148.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
146.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
144.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
144.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
144.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
144.3
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
139.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
139.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
139.3
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
135.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
134.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
132.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
131.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
130.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
129.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
128.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
126.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
122.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
122.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
120.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
120.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
120.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
119.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
119.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
119.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
118.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
116.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
115.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
114.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
113.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
111.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
110.2
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
109.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
109.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
105.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
103.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
103.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
102.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
100.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
100.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
99.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
98.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
98.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
96.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
92.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
90.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
90.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
88.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
88.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
87.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
86.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
85.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
83.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
82.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
77.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
72.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
72.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
70.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
69.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
63.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
63.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
61.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
58.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
58.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
57.3
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
27.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 27.1
Samples: 4
Max nTPM: 33.6
Min nTPM: 23.5
Sample A
Male
33.6
Sample B
Male
25.5
Sample C
Female
23.5
Sample D
Female
25.6
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.