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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:13.6 nTPM
FANTOM5:32.9 Scaled Tags Per Million
Pig:13.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA026294Antibody HPA053709
Glial cells MediumNot detected
Neuronal cells MediumLow



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 13.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 13.6
Samples: 246

Max nTPM: 34.2
Min nTPM: 3.3
Std nTPM: 4.9
Median nTPM: 13.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 34.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 29.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 27.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 27.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 26.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 25.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 25.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 24.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 24.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 24.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 23.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 23.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 23.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 23.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 23.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 23.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 22.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 22.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 21.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 20.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 20.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 20.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 20.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 19.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 19.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 19.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 19.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 19.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 19.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 19.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 18.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 18.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 18.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 18.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 18.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 18.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 18.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 18.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 18.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 18.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 18.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 17.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 17.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 17.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 17.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 17.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 17.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 17.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 17.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 17.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 17.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 17.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 17.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 16.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 16.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 16.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 16.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 16.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 16.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 16.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 16.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 16.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 16.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 16.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 15.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 15.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 15.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 15.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 15.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 15.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 15.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 15.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 15.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 14.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 14.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 14.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 14.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 14.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 14.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 14.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 14.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 14.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 14.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 14.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 14.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 14.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 14.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 14.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 14.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 14.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 14.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 14.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 14.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 14.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 14.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 14.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 14.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 13.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 13.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 13.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 13.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 13.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 13.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 13.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 13.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 13.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 13.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 13.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 13.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 13.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 13.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 13.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 13.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 13.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 13.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 13.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 13.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 13.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 13.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 13.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 12.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 12.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 12.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 12.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 12.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 12.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 12.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 12.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 12.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 12.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 12.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 12.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 12.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 12.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 12.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 11.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 11.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 11.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 11.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 11.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 11.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 11.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 11.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 11.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 11.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 11.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 11.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 11.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 11.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 11.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 11.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 11.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 11.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 11.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 11.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 11.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 11.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 11.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 11.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 11.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 11.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 10.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 10.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 10.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 10.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 10.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 10.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 10.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 10.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 10.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 10.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 10.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 10.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 10.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 10.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 10.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 10.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 10.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 10.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 10.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 10.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 10.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 10.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 10.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 10.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 10.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 10.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 10.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 9.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 9.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 9.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 9.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 9.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 9.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 9.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 9.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 9.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 9.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 9.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 9.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 9.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 8.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 8.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 8.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 8.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 8.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 8.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 8.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 8.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 8.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 7.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 7.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 7.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 7.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 7.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 7.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 7.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 7.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 7.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 7.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 6.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 6.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 6.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 6.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 6.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 5.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 5.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 5.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 3.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 32.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 32.9
FF:10164-103B2 76 years, female 32.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 13.2
Pig sample Sample description nTPM
Caudate
nTPM: 13.2
Samples: 4

Max nTPM: 15.1
Min nTPM: 11.0
Sample A Female 11.0
Sample B Female 14.1
Sample C Male 15.1
Sample D Male 12.5

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