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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3.6
Min RPKM: 0.3
Std RPKM: 0.6
Median RPKM: 1.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
3.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
3.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
2.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
2.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
2.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
2.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
2.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
2.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
2.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
2.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
2.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
2.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
2.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
2.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
2.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
2.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
2.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
2.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
1.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
1.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
1.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
1.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
1.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1.8
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
1.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
1.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
1.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
1.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
1.6
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
1.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
1.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
1.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
1.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
1.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
1.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1.4
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
1.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
1.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
1.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
1.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
1.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
1.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
1.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
1.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
1.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
1.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
1.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
1.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
1.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
1.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
1.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
1.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
0.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
0.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
0.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
0.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
0.9
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
0.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
0.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
0.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
0.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
0.8
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
0.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
0.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
0.8
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
0.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
0.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
0.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
0.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
0.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
0.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
0.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
0.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
0.3
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
0.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
