AGA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:9.1 FPKM
GTEx:4.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031415

 

Antibody HPA031417

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Not detected  

Peripheral nerve/ganglion

Medium   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

9.1

overview Male, age 54
Sample 1
FPKM: 10.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.0
Samples: 149

Max RPKM: 7.3
Min RPKM: 1.1
Std RPKM: 1.2
Median RPKM: 3.9
GTEX-12WSG-2426-SM-5EQLZ 7.3
GTEX-147GR-2826-SM-5RQK8 7.2
GTEX-12ZZY-2726-SM-5EQ45 6.9
GTEX-13U4I-2626-SM-5SI9C 6.8
GTEX-ZAB4-2426-SM-5HL8A 6.5
GTEX-13SLW-2826-SM-5Q5ES 6.4
GTEX-11DXY-2026-SM-5N9CZ 6.4
GTEX-13X6K-2726-SM-5O9DG 6.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.2
Samples: 196

Max RPKM: 8.7
Min RPKM: 0.8
Std RPKM: 1.5
Median RPKM: 5.2
GTEX-X15G-1326-SM-4PQZJ 8.7
GTEX-YB5E-1626-SM-5IFIQ 8.3
GTEX-WFON-1426-SM-4LVMT 8.2
GTEX-Q2AI-0926-SM-48U1F 8.2
GTEX-P4PP-1426-SM-3NM9L 8.1
GTEX-13O21-2426-SM-5MR4A 7.9
GTEX-UJHI-1126-SM-4IHLN 7.9
GTEX-13111-0726-SM-5DUVE 7.9
Show all