BEST2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:12.6 FPKM
GTEx:14.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA046229

 

Endothelial cells

Not detected  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not detected  
 
 

COLON - HPA RNA-seq

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Average FPKM

12.6

overview Male, age 54
Sample 1
FPKM: 9.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 16.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 43.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

14.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 16.4
Min RPKM: 0
Std RPKM: 2
Median RPKM: 0
GTEX-Y5LM-1426-SM-5RQJL 16.4
GTEX-V955-1726-SM-4JBHF 13.8
GTEX-XBED-1726-SM-47JYO 10.2
GTEX-11EQ9-1526-SM-5PNY7 8.1
GTEX-YJ8A-1726-SM-5P9IQ 5.0
GTEX-WFON-1326-SM-4LVMN 2.0
GTEX-WQUQ-2626-SM-4MVNP 1.9
GTEX-ZG7Y-1826-SM-4WWD3 1.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 29.2
Samples: 196

Max RPKM: 123.3
Min RPKM: 0
Std RPKM: 30.8
Median RPKM: 19
GTEX-YB5E-1626-SM-5IFIQ 123.3
GTEX-R55G-1226-SM-48FDC 122.4
GTEX-WFON-1426-SM-4LVMT 115.5
GTEX-1122O-1526-SM-5N9CL 112.9
GTEX-13O21-2426-SM-5MR4A 104.2
GTEX-Y5LM-1526-SM-4VDTA 102.4
GTEX-XPVG-1826-SM-4B64X 99.1
GTEX-XUJ4-2026-SM-4BOOW 92.5
Show all