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COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
RNA expressioni 1
Consensus:12.6 nTPM
HPA:5.2 nTPM
GTEx:12.6 nTPM
FANTOM5:23.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA056419
Endothelial cells Medium
Glandular cells Medium
Peripheral nerve/ganglion Medium

COLON - HPA RNA-seqi
Average nTPM 5.2
overview Male, age 54 Colon sample 67
nTPM: 6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview Female, age 57 Colon sample 68
nTPM: 5.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview Male, age 80 Colon sample 69
nTPM: 2.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview Male, age 68 Colon sample 70
nTPM: 6.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 68 Colon sample 76
nTPM: 10
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview Female, age 61 Colon sample 299
nTPM: 5.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview Male, age 80 Colon sample 300
nTPM: 3.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview Female, age 78 Colon sample 368
nTPM: 4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview Male, age 84 Colon sample 381
nTPM: 5.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview Male, age 80 Colon sample 384
nTPM: 2.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview Female, age 78 Colon sample 389
nTPM: 4.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview Female, age 69 Colon sample 391
nTPM: 6.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview Female, age 72 Colon sample 403
nTPM: 5.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 12.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 14.9
Samples: 373

Max nTPM: 66.0
Min nTPM: 1.6
Std nTPM: 8.9
Median nTPM: 13.2
GTEX-YEC3-2026-SM-DKPOL 50-59 years, male 66.0
GTEX-1LVAM-1726-SM-DHXKQ 50-59 years, female 47.8
GTEX-1H3VY-2526-SM-9KNW1 50-59 years, male 43.8
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 43.4
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 41.6
GTEX-1PBJI-2526-SM-E6CP4 20-29 years, female 40.3
GTEX-1R9K5-2226-SM-DTX9G 50-59 years, male 37.8
GTEX-14PJ3-1226-SM-5ZZVY 50-59 years, male 37.3
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 37.2
GTEX-1KANA-1726-SM-CY8IG 20-29 years, male 37.2
GTEX-1AX9J-2526-SM-73KUY 60-69 years, male 36.7
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Colon - Transverse
Average nTPM: 10.5
Samples: 406

Max nTPM: 54.7
Min nTPM: 1.0
Std nTPM: 6.7
Median nTPM: 9.5
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 54.7
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 50.3
GTEX-1POEN-2026-SM-E6CRL 30-39 years, female 33.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 32.5
GTEX-Y114-1526-SM-4TT79 50-59 years, female 31.8
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 29.5
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 28.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 28.0
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 27.4
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 26.7
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 25.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 23.7
FF:10014-101C5 62,83,84 years, mixed 23.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.