We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ERBB3
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HYPOTHALAMUS

GENE/PROTEIN

Antibody validation


Dictionary

HYPOTHALAMUS - Expression summary

Protein expressioni

The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.

N/A

RNA expressioni

RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.

Read more

GTEx:6.8RPKM

HYPOTHALAMUS - Annotated protein expression

Pending normal tissue analysis


HYPOTHALAMUS - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Read more

Pending HPA RNA-seq analysis


HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.

Read more

Average RPKM

6.8

GTEx sample id

RPKM

 

Brain - Hypothalamus

Brain - Hypothalamus
RPKM: 6.8
Samples: 96

Max RPKM: 27.4
Min RPKM: 0.6
Std RPKM: 5.6
Median RPKM: 5
GTEX-11H98-0011-R8a-SM-5NQ8V 27.4
GTEX-R55E-0011-R8A-SM-2TC66 27.0
GTEX-N7MS-0011-R8a-SM-2YUMK 24.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 19.9
GTEX-12WSA-0011-R8a-SM-5P9EX 18.6
GTEX-RVPU-0011-R8A-SM-5SI8I 17.1
GTEX-XMD1-0011-R8A-SM-4AT48 15.9
GTEX-TSE9-0011-R8A-SM-3DB7R 15.4
GTEX-T6MN-0011-R8A-SM-32QP3 15.2
GTEX-145LS-0011-R8b-SM-5PNXA 14.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 14.6
GTEX-P44H-0011-R8A-SM-2XCEL 13.7
GTEX-WWYW-0011-R8A-SM-3NB3S 12.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 12.5
GTEX-Q2AG-0011-R8A-SM-2HMK5 11.6
GTEX-11WQC-0011-R8b-SM-57WCH 11.5
GTEX-XOTO-0011-R8A-SM-4B65J 11.4
GTEX-WZTO-0011-R8A-SM-4E3II 10.8
GTEX-N7MT-0011-R8a-SM-2I5GU 10.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 10.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 10.1
GTEX-145LU-0011-R8b-SM-5PNZG 10.0
GTEX-13X6J-0011-R8b-SM-5PNUA 9.9
GTEX-Z93S-0011-R8a-SM-4RGNL 9.4
GTEX-YJ89-0011-R8b-SM-4SOK8 8.9
GTEX-13QJC-0011-R8b-SM-5S2U6 8.7
GTEX-13FLV-0011-R8a-SM-5LZZE 8.6
GTEX-QVJO-0011-R8A-SM-447C7 8.0
GTEX-11GSP-0011-R8b-SM-5NQ79 7.9
GTEX-13X6I-0011-R8a-SM-5PNZF 7.7
GTEX-13JVG-0011-R8a-SM-5KM3E 7.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 7.5
GTEX-11ONC-0011-R8b-SM-5NQ87 7.3
GTEX-YFC4-0011-R8a-SM-4SOK3 7.2
GTEX-S7SE-0011-R8A-SM-2XCDG 7.1
GTEX-ZUA1-0011-R8b-SM-51MST 6.9
GTEX-X4XX-0011-R8B-SM-46MWM 6.5
GTEX-13OVH-0011-R8b-SM-5MR35 6.4
GTEX-13O3O-0011-R8b-SM-5LUAL 6.0
GTEX-11ZUS-0011-R8a-SM-5BC73 5.8
GTEX-QMR6-0011-R8A-SM-32PKJ 5.8
GTEX-131XH-0011-R8a-SM-5EGLL 5.6
GTEX-WVLH-0011-R8A-SM-3MJFC 5.4
GTEX-14ASI-0011-R8b-SM-5S2UB 5.3
GTEX-1313W-0011-R8a-SM-5DUVM 5.3
GTEX-PWO3-0011-R8A-SM-2I5GD 5.3
GTEX-13OVL-0011-R8a-SM-5L3HH 5.3
GTEX-RU72-0011-R8A-SM-2TF61 5.1
GTEX-132Q8-0011-R8b-SM-5DUWX 4.9
GTEX-13OW6-0011-R8a-SM-5L3GF 4.8
GTEX-11OF3-0011-R8b-SM-57WCS 4.7
GTEX-X4XY-0011-R8A-SM-46MVC 4.6
GTEX-13OW5-0011-R8a-SM-5L3GQ 4.4
GTEX-144GL-0011-R8a-SM-5Q5B1 4.3
GTEX-X261-0011-R8A-SM-4E3I5 4.1
GTEX-145MH-0011-R8a-SM-5PNUL 4.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 3.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 3.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 3.9
GTEX-13QIC-0011-R8b-SM-5O9CV 3.9
GTEX-11ZTS-0011-R8a-SM-57WDI 3.5
GTEX-131XW-0011-R8a-SM-5DUWY 3.5
GTEX-13NZ8-0011-R8b-SM-5KM48 3.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 3.3
GTEX-1445S-0011-R8a-SM-5PNWX 3.3
GTEX-NL4W-0011-R8a-SM-2I3G4 3.1
GTEX-13N1W-0011-R8a-SM-5MR56 3.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 3.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 2.7
GTEX-ZXG5-0011-R8a-SM-57WD1 2.7
GTEX-T5JC-0011-R8A-SM-32PLM 2.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 2.6
GTEX-13G51-0011-R8b-SM-5LZZ4 2.6
GTEX-147F4-0011-R8b-SM-5S2UN 2.6
GTEX-R55F-0011-R8A-SM-2TF4F 2.5
GTEX-NL3H-0011-R8a-SM-5S2VF 2.4
GTEX-1399T-0011-R8b-SM-5IJD8 2.4
GTEX-13CF2-0011-R8b-SM-5IJCX 2.3
GTEX-13SLW-0011-R8b-SM-5SI64 2.3
GTEX-13FXS-0011-R8a-SM-5J1MN 2.3
GTEX-13PDP-0011-R8b-SM-5O9CS 2.2
GTEX-13OW8-0011-R8a-SM-5L3G5 2.1
GTEX-X585-0011-R8A-SM-46MUX 2.1
GTEX-13NYB-0011-R8a-SM-5KM4R 2.1
GTEX-ZF28-0011-R8a-SM-4WWFW 2.1
GTEX-13NYS-0011-R8a-SM-5MR5H 2.0
GTEX-13OW7-0011-R8b-SM-5L3HR 1.8
GTEX-QVUS-0011-R8A-SM-3GAD7 1.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 1.7
GTEX-139TS-0011-R8a-SM-5J1NP 1.7
GTEX-11WQK-0011-R8a-SM-5BC7C 1.6
GTEX-13IVO-0011-R8a-SM-5L3DY 1.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 1.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 1.1
GTEX-14753-0011-R8b-SM-5S2U1 0.8
GTEX-13CIG-0011-R8b-SM-5LZX5 0.6
Show all

HYPOTHALAMUS - FANTOM5 CAGEi

Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.

Read more

No Fantom CAGE analysis found for this gene / tissue

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.