AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		44.416
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:5.6 nTPM
HPA:5.6 nTPM
GTEx:3.4 nTPM
FANTOM5:44.0 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:28.8 nTPM
Allen mouse:4.6 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA023822
Amygdala mean intensity 44.416
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 44.267
Basal medial amygdaloid nucleus 23.747
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 13.743
Cortical amygdala 33.052
Central amygdala 17.195
Medial amygdaloid nucleus 19.577

AMYGDALA - HPA Brain RNA-seq
Max nTPM 5.6
Sample id Sample description nTPM
Amygdala
nTPM: 4.0
2517 Female, age 94, left hemisphere 4.7
2814 Male, age 76, right hemisphere 4.4
2514 Male, age 75, right hemisphere 4.3
2695 Female, age 67, right hemisphere 3.5
1987 Female, age 91, left hemisphere 2.9
Basal amygdala
nTPM: 4.4
1955 Male, age 76, both hemispheres 5.8
2110 Male, age 80, left hemisphere 5.6
2827 Female, age 67, right hemisphere 4.1
2609 Male, age 75, right hemisphere 3.9
2685 Female, age 94, left hemisphere 3.8
2243 Female, age 91, right hemisphere 3.3
Central amygdala
nTPM: 4.1
1905 Male, age 76, both hemispheres 4.8
2239 Male, age 80, left hemisphere 4.7
2515 Male, age 75, right hemisphere 4.2
2826 Female, age 94, left hemisphere 3.3
2701 Female, age 91, right hemisphere 3.2
Corticomedial amygdala
nTPM: 5.6
2535 Female, age 67, right hemisphere 9.3
2429 Female, age 94, left hemisphere 7.4
2240 Male, age 76, both hemispheres 4.9
2428 Male, age 75, right hemisphere 4.2
2829 Male, age 80, left hemisphere 3.9
2242 Female, age 91, right hemisphere 3.7
Lateral amygdala
nTPM: 4.9
1883 Male, age 76, both hemispheres 6.3
2516 Male, age 75, right hemisphere 5.5
2830 Female, age 67, right hemisphere 5.3
2255 Female, age 91, right hemisphere 4.3
2256 Male, age 80, left hemisphere 4.1
2534 Female, age 94, left hemisphere 4.0
Stria terminalis, bed nucleus
nTPM: 4.4
1974 Female, age 91, both hemispheres 4.9
2201 Male, age 74, unknown 4.6
2486 Female, age 94, both hemispheres 3.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 3.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 3.4
Samples: 152

Max nTPM: 6.8
Min nTPM: 1.1
Std nTPM: 1.0
Median nTPM: 3.2
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 6.8
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 5.7
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 5.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 5.5
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 5.2
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 5.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 5.0
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 5.0
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 5.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 5.0
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 4.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 44.0
FF:10151-102I7 76 years, female 44.0

AMYGDALA - Pig RNA-seqi
Average nTPM 19.8
Pig sample Sample description nTPM
Amygdala
nTPM: 19.8
Samples: 4

Max nTPM: 21.1
Min nTPM: 18.5
Sample A Female 20.9
Sample B Female 21.1
Sample C Male 18.5
Sample D Male 18.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 28.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 28.8
Samples: 4

Max nTPM: 30.5
Min nTPM: 27.5
Sample A Male 30.5
Sample B Male 28.3
Sample C Female 27.5
Sample D Female 28.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.6
77620265 Antisense, RP_070129_05_E04, Mouse strain C57BL/6J (56 days, male) 4.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.