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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1271.7
nTPM
HPA Brain:
1993.1
nTPM
GTEx:
1271.7
nTPM
FANTOM5:
2232.8
Scaled Tags Per Million
Pig:
2633.2
nTPM
Mouse:
591.4
nTPM
Allen mouse:
23.3
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
1993.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 1741.5
2019
Male, age 18, unknown
1985.1
1870
Female, age 42, unknown
1962.9
1830
Male, age 51, unknown
1879.6
2411
Female, age 72, unknown
1873.3
1833
Male, age 53, unknown
1824.2
2828
Female, age 72, unknown
1769.7
2666
Male, age 74, left hemisphere
1756.1
1827
Male, age 72, unknown
1572.5
2586
Male, age 75, left hemisphere
1530.5
2219
Male, age 76, both hemispheres
1260.9
Dorsal raphe nucleus nTPM: 1656.8
2750
Male, age 76, both hemispheres
1957.2
2298
Female, age 72, unknown
1719.9
1828
Male, age 53, unknown
1627.8
2016
Female, age 72, unknown
1499.4
2047
Male, age 72, unknown
1479.8
Inferior colliculus nTPM: 1517.3
1848
Female, age 42, unknown
1582.3
2097
Female, age 72, unknown
1533.9
1890
Male, age 53, unknown
1489.3
2849
Male, age 72, unknown
1463.6
Median raphe nucleus nTPM: 1792.2
2220
Male, age 76, midline
1792.2
Periaquaductal grey, anterior nTPM: 1565.6
1947
Male, age 18, unknown
1637.9
1795
Male, age 51, unknown
1619.8
2502
Female, age 75, unknown
1439.1
Periaquaductal grey, dorsal nTPM: 1431.8
2850
Male, age 76, both hemispheres
1614.9
1831
Male, age 72, unknown
1501.6
2464
Female, age 72, unknown
1373.8
1840
Male, age 53, unknown
1237.0
Periaquaductal grey, lateral nTPM: 1598.9
2272
Male, age 74, both hemispheres
1846.4
2140
Male, age 76, both hemispheres
1496.3
2053
Male, age 18, unknown
1454.0
Pretectal area nTPM: 1711.3
1817
Female, age 42, unknown
2036.3
2007
Male, age 72, unknown
1851.1
1815
Male, age 53, unknown
1829.9
2273
Male, age 74, both hemispheres
1797.1
1944
Female, age 72, unknown
1782.8
1816
Male, age 51, unknown
1667.7
2667
Female, age 75, unknown
1642.3
2407
Male, age 75, both hemispheres
1628.5
2224
Female, age 72, unknown
1595.2
2316
Male, age 76, right hemisphere
1516.5
2825
Male, age 18, unknown
1477.1
Red nucleus nTPM: 1993.1
1865
Male, age 51, unknown
2212.3
1904
Male, age 53, unknown
2156.1
2769
Male, age 72, unknown
2143.7
2227
Male, age 72, unknown
2127.0
2785
Male, age 18, unknown
2123.0
1821
Female, age 72, unknown
2080.1
2725
Female, age 75, unknown
2069.7
1954
Female, age 42, unknown
2044.5
2503
Female, age 72, unknown
1969.5
2823
Male, age 76, right hemisphere
1894.3
2584
Male, age 75, left hemisphere
1707.2
2588
Male, age 74, left hemisphere
1390.2
Substantia nigra nTPM: 1759.9
2583
Male, age 75, right hemisphere
2142.2
2590
Female, age 75, unknown
2063.9
1916
Female, age 42, unknown
1815.6
1851
Male, age 51, unknown
1772.7
1941
Male, age 53, unknown
1765.1
1889
Female, age 72, unknown
1748.4
2665
Male, age 74, both hemispheres
1689.6
2699
Male, age 18, unknown
1618.1
2409
Female, age 72, unknown
1571.0
2241
Male, age 72, unknown
1412.5
Superior colliculus nTPM: 1678.7
1913
Female, age 42, unknown
2062.5
1995
Male, age 72, unknown
1951.7
2587
Male, age 74, left hemisphere
1948.0
1796
Male, age 53, unknown
1751.0
2261
Male, age 18, unknown
1749.2
2087
Female, age 72, unknown
1653.6
1839
Male, age 51, unknown
1565.8
2668
Female, age 75, unknown
1513.9
1895
Male, age 76, right hemisphere
1298.7
2664
Male, age 75, both hemispheres
1292.7
Ventral tegmental area nTPM: 1835.2
2223
Female, age 72, unknown
2361.2
2218
Male, age 76, both hemispheres
1898.1
2410
Female, age 72, unknown
1885.6
1915
Female, age 42, unknown
1689.7
2021
Male, age 53, unknown
1638.3
1942
Male, age 51, unknown
1538.4
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1271.7
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 1271.7
Samples: 139
Max nTPM: 3111.1
Min nTPM: 628.5
Std nTPM: 476.6
Median nTPM: 1106.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
3111.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
2922.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
2824.1
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
2799.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
2744.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
2634.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
2608.3
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
2455.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
2265.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
2215.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
2102.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
2036.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1917.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1883.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
1806.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1767.0
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1683.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1662.9
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
1634.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1634.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
1622.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1620.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1575.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
1572.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1557.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1527.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
1526.6
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
1517.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1502.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1458.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
1424.2
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1423.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
1417.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1415.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
1381.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
1381.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
1378.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
1345.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
1341.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1333.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
1333.2
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1328.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1326.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
1324.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
1316.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
1293.1
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
1285.3
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1284.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
1276.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
1269.6
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
1248.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
1245.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1231.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
1199.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
1180.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
1176.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1160.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
1152.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
1147.8
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1145.8
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1142.1
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1139.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
1128.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
1115.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
1115.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
1114.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
1110.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
1108.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1106.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
1106.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
1102.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
1098.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1098.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1096.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
1094.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
1087.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
1075.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
1074.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
1070.6
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
1069.6
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
1066.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
1063.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
1062.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
1057.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1057.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1055.0
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
1049.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1042.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1036.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
1035.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
1034.0
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1032.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1031.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
1031.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
1017.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
1016.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1014.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
1009.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
1001.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
993.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
991.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
989.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
989.7
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
986.7
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
982.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
978.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
968.8
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
967.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
966.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
959.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
958.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
957.4
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
951.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
949.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
946.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
946.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
938.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
936.5
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
933.9
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
933.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
931.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
915.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
913.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
904.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
896.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
895.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
879.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
878.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
862.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
845.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
835.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
826.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
821.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
818.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
780.3
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
744.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
725.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
702.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
628.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
591.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 591.4
Samples: 4
Max nTPM: 651.7
Min nTPM: 554.3
Sample A
Male
651.7
Sample B
Male
564.0
Sample C
Female
554.3
Sample D
Female
595.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.