ME2

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:12.7 FPKM
GTEx:9.0 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA008247

 

Antibody HPA008880

 

Adipocytes

Low   Medium  

Chondrocytes

Not available   Not available  

Fibroblasts

Not detected   Medium  

Peripheral nerve

Low   Low  
   
   
   

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not available
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA008247

 

Antibody HPA008880

 

Adipocytes

Low   Low  

Chondrocytes

Not available   Not available  

Fibroblasts

Not detected   Not detected  

Peripheral nerve

Low   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

12.7

N/A Female, age 80
Sample 1
FPKM: 8.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 9.8
N/A Female, age 57
Sample 3
FPKM: 8.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 24.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 11.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

9.0

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 8.9
Samples: 350

Max RPKM: 26
Min RPKM: 5.2
Std RPKM: 2.4
Median RPKM: 8.4
GTEX-QDT8-0226-SM-32PL4 26.0
GTEX-POMQ-2326-SM-5S2VS 21.9
GTEX-13JVG-0226-SM-5J1MW 20.7
GTEX-111VG-2326-SM-5N9BK 19.4
GTEX-O5YT-0226-SM-32PK5 18.8
GTEX-OOBK-0226-SM-2YUMF 16.9
GTEX-11EQ8-0226-SM-5EQ5G 16.9
GTEX-Q734-1826-SM-2I3EL 16.4
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 9.0
Samples: 227

Max RPKM: 22.8
Min RPKM: 5.1
Std RPKM: 2.4
Median RPKM: 8.4
GTEX-ZZPU-0326-SM-5N9BJ 22.8
GTEX-UPK5-1826-SM-3GAEB 17.7
GTEX-13N11-1826-SM-5IJDS 16.5
GTEX-1128S-0926-SM-5GZZU 16.4
GTEX-117YW-0826-SM-5H11O 16.1
GTEX-117YX-0726-SM-5GIET 15.2
GTEX-ZYVF-1026-SM-5E44V 15.1
GTEX-W5X1-1426-SM-3GIKH 14.8
Show all