ME2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:32.0 FPKM
GTEx:14.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA008247

 

Antibody HPA008880

 

Endothelial cells

Medium   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

High   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

32.0

overview Male, age 54
Sample 1
FPKM: 16.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 29.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 37.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 43.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 34.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 25.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 38.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

14.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 12.2
Samples: 149

Max RPKM: 18.7
Min RPKM: 5.8
Std RPKM: 2
Median RPKM: 12
GTEX-ZAJG-2626-SM-5S2NU 18.7
GTEX-145ME-1126-SM-5SIAT 17.2
GTEX-XV7Q-2226-SM-4BRVY 16.8
GTEX-14E6E-1726-SM-5S2R6 16.7
GTEX-XBED-1726-SM-47JYO 16.2
GTEX-XAJ8-0726-SM-47JY5 16.0
GTEX-WYVS-1126-SM-4SOJX 16.0
GTEX-ZPIC-2626-SM-57WE2 16.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 17.3
Samples: 196

Max RPKM: 40.5
Min RPKM: 6.7
Std RPKM: 5.5
Median RPKM: 16.6
GTEX-11P82-1026-SM-5BC5J 40.5
GTEX-U4B1-1126-SM-4DXV3 32.4
GTEX-TML8-1326-SM-4DXTO 31.8
GTEX-1399R-2226-SM-5P9JB 31.5
GTEX-XV7Q-2126-SM-4BRVX 30.3
GTEX-QV31-0826-SM-4R1KR 30.1
GTEX-ZF2S-1926-SM-4WWAN 30.0
GTEX-R53T-1326-SM-48FCQ 28.3
Show all