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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:60.7 nTPM
HPA:60.7 nTPM
GTEx:73.9 nTPM
FANTOM5:149.5 Scaled Tags Per Million
Pig:33.3 nTPM
Mouse:10.0 nTPM
Allen mouse:1.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA015536
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 60.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 55.5
2481 Female, age 94, left hemisphere 63.9
1857 Female, age 85, left hemisphere 57.3
2288 Male, age 75, left hemisphere 57.0
1854 Male, age 80, left hemisphere 55.9
2290 Female, age 72, unknown 55.6
2846 Female, age 79, unknown 53.7
2289 Male, age 61, right hemisphere 53.0
1781 Male, age 74, unknown 47.8
Claustrum
nTPM: 46.5
2198 Male, age 80, both hemispheres 49.2
2196 Female, age 79, unknown 47.6
2392 Female, age 94, both hemispheres 47.6
2491 Male, age 75, both hemispheres 47.2
1956 Male, age 74, unknown 47.1
2568 Male, age 61, both hemispheres 46.2
2284 Female, age 91, both hemispheres 45.3
2645 Female, age 72, unknown 44.6
2292 Female, age 85, both hemispheres 44.2
Globus pallidus, externus
nTPM: 60.7
1996 Male, age 80, right hemisphere 67.7
2772 Female, age 79, unknown 64.4
2646 Male, age 61, right hemisphere 63.6
2395 Male, age 75, both hemispheres 54.2
2567 Female, age 72, unknown 53.4
Globus pallidus, internus
nTPM: 60.2
2037 Male, age 80, right hemisphere 64.8
1818 Male, age 74, unknown 63.7
2287 Male, age 75, right hemisphere 62.0
2483 Female, age 94, right hemisphere 62.0
2778 Female, age 91, both hemispheres 59.0
2111 Female, age 85, right hemisphere 57.9
2566 Female, age 72, unknown 52.2
Nucleus accumbens
nTPM: 53.5
2286 Male, age 75, left hemisphere 58.8
2698 Female, age 72, unknown 56.6
1806 Female, age 85, left hemisphere 55.4
2391 Female, age 94, left hemisphere 53.8
2732 Male, age 80, right hemisphere 53.3
1783 Male, age 74, unknown 51.0
2824 Male, age 61, right hemisphere 50.8
1856 Female, age 91, right hemisphere 48.1
Nucleus basalis of Meynert
nTPM: 55.4
2569 Male, age 61, both hemispheres 65.8
2393 Male, age 80, right hemisphere 53.1
2821 Male, age 75, both hemispheres 51.3
2484 Female, age 94, left hemisphere 51.2
Nucleus of the diagonal band
nTPM: 49.7
1812 Female, age 91, both hemispheres 53.4
2775 Male, age 80, right hemisphere 50.5
1979 Male, age 74, unknown 50.3
2195 Female, age 85, both hemispheres 47.7
2029 Male, age 61, right hemisphere 46.6
Olfactory tubercle
nTPM: 48.4
1846 Male, age 80, right hemisphere 51.4
2856 Male, age 75, right hemisphere 50.6
2487 Female, age 94, left hemisphere 47.4
1998 Female, age 91, both hemispheres 44.2
Putamen
nTPM: 52.6
2482 Female, age 94, left hemisphere 59.6
2647 Male, age 75, left hemisphere 52.7
2489 Female, age 72, unknown 52.5
1829 Male, age 74, unknown 52.2
2466 Female, age 79, unknown 51.6
1838 Male, age 80, right hemisphere 50.4
1937 Female, age 91, right hemisphere 49.5
Septal nuclei
nTPM: 51.2
2199 Male, age 80, right hemisphere 56.5
2059 Female, age 85, both hemispheres 53.9
2394 Male, age 61, left hemisphere 53.2
1960 Male, age 74, unknown 49.6
2629 Female, age 94, right hemisphere 49.2
2031 Female, age 72, unknown 48.4
2009 Female, age 91, both hemispheres 47.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 73.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 66.4
Samples: 246

Max nTPM: 123.2
Min nTPM: 29.8
Std nTPM: 18.3
Median nTPM: 64.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 123.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 121.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 121.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 116.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 115.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 108.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 108.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 107.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 106.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 105.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 104.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 102.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 100.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 100.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 99.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 98.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 97.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 96.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 96.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 95.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 94.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 92.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 91.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 91.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 91.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 91.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 89.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 89.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 89.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 87.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 87.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 87.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 86.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 85.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 85.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 85.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 85.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 84.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 84.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 84.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 83.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 83.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 83.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 82.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 82.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 81.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 81.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 81.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 80.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 79.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 79.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 79.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 79.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 79.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 78.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 77.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 77.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 76.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 76.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 76.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 76.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 76.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 76.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 75.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 75.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 75.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 75.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 75.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 75.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 74.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 74.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 74.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 74.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 74.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 74.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 74.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 72.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 72.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 71.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 71.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 71.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 71.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 70.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 70.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 70.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 70.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 69.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 69.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 69.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 69.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 68.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 67.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 67.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 67.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 67.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 67.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 66.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 66.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 66.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 66.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 66.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 66.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 66.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 66.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 65.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 64.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 64.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 64.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 63.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 63.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 63.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 63.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 63.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 63.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 62.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 62.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 62.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 62.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 62.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 62.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 62.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 61.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 61.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 61.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 61.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 60.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 60.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 60.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 60.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 60.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 59.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 59.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 59.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 59.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 59.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 58.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 58.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 57.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 57.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 57.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 57.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 57.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 56.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 56.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 56.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 55.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 55.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 55.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 55.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 54.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 54.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 54.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 54.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 54.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 53.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 53.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 52.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 52.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 52.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 52.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 52.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 51.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 51.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 50.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 50.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 50.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 50.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 50.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 50.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 49.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 49.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 49.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 48.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 48.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 47.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 47.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 47.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 47.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 46.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 46.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 46.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 46.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 45.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 45.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 44.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 44.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 43.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 43.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 43.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 43.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 43.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 42.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 42.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 41.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 41.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 41.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 40.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 39.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 39.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 38.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 37.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 37.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 36.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 35.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 35.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 31.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 61.7
Samples: 246

Max nTPM: 165.4
Min nTPM: 36.9
Std nTPM: 17.1
Median nTPM: 57.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 165.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 122.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 106.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 103.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 101.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 101.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 98.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 98.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 97.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 96.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 96.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 95.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 95.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 93.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 93.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 93.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 93.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 93.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 93.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 91.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 91.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 90.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 87.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 86.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 86.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 85.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 85.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 84.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 83.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 83.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 83.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 83.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 82.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 82.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 81.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 81.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 80.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 79.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 79.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 78.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 78.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 78.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 77.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 76.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 76.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 75.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 75.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 75.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 75.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 74.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 73.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 72.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 72.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 71.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 71.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 71.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 70.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 70.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 68.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 68.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 68.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 68.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 67.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 67.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 67.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 67.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 66.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 66.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 66.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 65.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 65.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 65.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 64.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 64.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 64.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 64.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 64.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 63.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 63.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 63.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 63.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 63.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 63.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 63.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 63.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 63.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 63.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 62.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 62.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 62.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 61.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 61.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 61.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 61.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 61.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 60.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 60.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 60.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 60.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 60.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 60.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 60.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 60.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 60.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 60.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 59.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 59.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 59.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 59.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 59.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 59.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 58.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 58.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 58.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 58.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 58.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 58.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 57.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 57.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 57.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 57.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 57.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 57.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 57.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 57.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 56.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 56.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 56.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 56.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 56.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 55.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 55.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 55.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 55.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 55.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 55.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 54.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 54.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 54.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 54.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 54.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 54.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 54.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 54.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 53.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 53.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 53.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 53.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 53.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 53.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 53.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 53.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 53.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 52.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 52.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 52.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 52.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 52.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 52.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 52.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 51.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 51.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 51.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 51.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 51.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 51.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 51.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 50.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 50.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 50.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 50.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 50.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 50.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 50.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 50.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 50.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 50.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 50.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 50.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 49.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 49.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 49.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 49.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 49.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 49.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 48.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 48.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 48.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 48.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 48.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 48.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 48.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 47.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 47.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 47.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 47.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 47.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 47.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 47.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 47.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 47.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 46.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 46.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 45.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 45.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 45.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 45.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 45.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 45.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 45.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 44.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 44.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 44.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 44.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 44.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 43.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 43.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 43.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 43.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 42.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 42.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 42.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 42.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 42.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 41.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 40.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 40.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 39.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 39.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 38.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 37.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 37.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 36.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 73.9
Samples: 205

Max nTPM: 140.0
Min nTPM: 32.7
Std nTPM: 21.8
Median nTPM: 71.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 140.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 134.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 134.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 134.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 132.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 128.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 126.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 126.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 121.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 114.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 111.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 110.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 109.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 109.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 108.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 108.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 108.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 108.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 105.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 103.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 102.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 102.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 101.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 101.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 101.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 101.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 100.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 100.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 97.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 95.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 95.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 95.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 94.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 94.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 94.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 93.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 92.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 92.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 91.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 91.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 91.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 90.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 90.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 89.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 89.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 88.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 88.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 88.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 88.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 88.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 87.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 87.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 87.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 87.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 86.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 86.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 85.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 84.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 84.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 83.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 82.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 82.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 82.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 82.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 81.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 81.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 80.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 80.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 79.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 79.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 78.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 78.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 78.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 78.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 78.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 77.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 77.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 77.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 76.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 76.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 76.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 76.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 76.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 76.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 75.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 75.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 75.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 75.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 74.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 74.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 74.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 74.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 74.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 74.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 74.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 74.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 73.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 73.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 73.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 72.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 72.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 72.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 71.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 71.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 71.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 71.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 71.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 71.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 70.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 70.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 68.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 68.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 68.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 67.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 67.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 66.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 66.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 66.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 66.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 66.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 66.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 66.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 65.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 65.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 64.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 64.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 64.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 64.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 63.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 63.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 63.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 62.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 62.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 62.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 62.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 62.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 62.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 61.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 61.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 61.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 61.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 60.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 60.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 58.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 57.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 57.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 57.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 57.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 57.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 57.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 57.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 57.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 57.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 56.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 56.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 54.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 54.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 54.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 53.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 53.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 53.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 53.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 53.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 53.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 53.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 52.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 52.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 51.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 51.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 51.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 51.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 51.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 50.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 50.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 50.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 50.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 50.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 49.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 49.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 48.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 48.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 48.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 47.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 47.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 47.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 46.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 46.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 45.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 45.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 44.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 43.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 43.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 42.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 40.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 39.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 37.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 36.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 36.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 32.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 149.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 124.5
FF:10164-103B2 76 years, female 124.5
Globus pallidus
Scaled Tags Per Million: 149.5
FF:10161-103A8 76 years, female 170.3
FF:10175-103C4 60 years, female 128.6
Nucleus accumbens
Scaled Tags Per Million: 137.1
FF:10037-101F1 23-56 years, mixed 137.1
Putamen
Scaled Tags Per Million: 120.4
FF:10176-103C5 60 years, female 120.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 33.3
Pig sample Sample description nTPM
Caudate
nTPM: 28.5
Samples: 4

Max nTPM: 32.9
Min nTPM: 24.3
Sample A Female 24.3
Sample B Female 31.7
Sample C Male 32.9
Sample D Male 24.9
Putamen
nTPM: 32.4
Samples: 4

Max nTPM: 37.1
Min nTPM: 25.4
Sample A Female 34.4
Sample B Female 25.4
Sample C Male 37.1
Sample D Male 32.5
Septum
nTPM: 33.0
Samples: 4

Max nTPM: 36.5
Min nTPM: 31.4
Sample A Female 32.3
Sample B Female 31.8
Sample C Male 36.5
Sample D Male 31.4
Ventral pallidum
nTPM: 33.3
Samples: 4

Max nTPM: 41.3
Min nTPM: 24.8
Sample A Female 24.8
Sample B Female 35.0
Sample C Male 41.3
Sample D Male 32.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 10.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 10.0
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.4
Sample A Male 10.3
Sample B Male 10.9
Sample C Female 8.4
Sample D Female 10.4
Septum
nTPM: 9.5
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.6
Sample A Male 8.6
Sample B Male 10.0
Sample C Female 8.9
Sample D Female 10.4
Ventral forebrain
nTPM: 8.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.9
Sample A Male 7.9
Sample B Male 7.9
Sample C Female 10.0
Sample D Female 8.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.6
68744988 Antisense, RP_050210_01_A09, Mouse strain C57BL/6J (56 days, male) 1.6
Pallidum
Expression energy: 1.9
68744988 Antisense, RP_050210_01_A09, Mouse strain C57BL/6J (56 days, male) 1.9

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