HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:52.8 nTPM
HPA:52.8 nTPM
GTEx:55.9 nTPM
FANTOM5:120.0 Scaled Tags Per Million
Pig:35.1 nTPM
Mouse:8.9 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015536
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.8
Sample id Sample description nTPM
Hippocampus
nTPM: 52.8
2529 Female, age 94, left hemisphere 56.2
1898 Male, age 80, left hemisphere 53.4
2148 Female, age 91, left hemisphere 53.3
1911 Female, age 85, right hemisphere 52.5
1855 Male, age 76, left hemisphere 51.7
2621 Female, age 67, right hemisphere 49.7
Dentate gyrus
nTPM: 50.3
2528 Male, age 74, both hemispheres 53.8
2246 Female, age 85, both hemispheres 52.9
2010 Male, age 76, both hemispheres 51.3
2530 Female, age 94, left hemisphere 50.0
1927 Female, age 91, both hemispheres 48.5
2531 Female, age 67, both hemispheres 45.4
Entorhinal gyrus
nTPM: 49.8
2117 Female, age 91, right hemisphere 58.1
1938 Female, age 85, left hemisphere 53.6
2686 Male, age 75, right hemisphere 49.3
1787 Male, age 76, left hemisphere 47.5
2764 Male, age 80, right hemisphere 46.9
2613 Female, age 94, left hemisphere 43.5
Hippocampus, CA1
nTPM: 51.7
2527 Male, age 74, both hemispheres 55.3
1873 Female, age 85, both hemispheres 53.8
2749 Male, age 80, left hemisphere 50.3
2082 Female, age 91, right hemisphere 50.2
2045 Male, age 76, both hemispheres 49.1
Hippocampus, CA2
nTPM: 51.4
2249 Male, age 74, both hemispheres 55.0
2113 Female, age 91, right hemisphere 53.6
1892 Male, age 76, both hemispheres 51.5
1963 Male, age 80, left hemisphere 50.9
1940 Female, age 85, left hemisphere 50.5
2437 Female, age 94, left hemisphere 47.0
Hippocampus, CA3
nTPM: 50.2
2436 Male, age 74, both hemispheres 55.4
1891 Female, age 85, both hemispheres 53.5
1867 Male, age 76, both hemispheres 51.5
2861 Female, age 67, both hemispheres 48.4
2137 Male, age 80, left hemisphere 46.4
2620 Female, age 94, left hemisphere 45.9
Parahippocampal cortex
nTPM: 49.1
2692 Male, age 74, both hemispheres 52.3
1990 Female, age 91, right hemisphere 50.2
2250 Female, age 67, right hemisphere 50.2
1933 Female, age 85, both hemispheres 50.0
2245 Female, age 91, both hemispheres 49.8
1850 Male, age 80, both hemispheres 49.5
2622 Female, age 67, right hemisphere 49.5
2693 Female, age 94, both hemispheres 46.9
2018 Male, age 76, both hemispheres 46.8
2532 Female, age 72, left hemisphere 45.6
Perirhinal gyrus
nTPM: 48.1
1847 Female, age 91, left hemisphere 50.7
2521 Female, age 94, right hemisphere 48.8
1794 Male, age 80, right hemisphere 48.0
1841 Female, age 85, right hemisphere 47.6
2848 Male, age 76, right hemisphere 45.4
Subiculum
nTPM: 52.8
2729 Female, age 91, right hemisphere 57.7
2619 Male, age 74, both hemispheres 53.9
2042 Male, age 76, both hemispheres 52.8
2438 Female, age 94, left hemisphere 52.6
1977 Female, age 85, both hemispheres 50.2
1901 Male, age 80, both hemispheres 49.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.9
Samples: 197

Max nTPM: 88.5
Min nTPM: 31.4
Std nTPM: 10.5
Median nTPM: 55.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 88.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 87.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 83.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 82.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 80.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 78.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 78.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 77.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 76.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 76.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 75.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.0
FF:10153-102I9 76 years, female 129.2
FF:10169-103B7 60 years, female 110.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.4
Samples: 4

Max nTPM: 40.1
Min nTPM: 26.1
Sample A Female 40.1
Sample B Female 33.4
Sample C Male 37.8
Sample D Male 26.1
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 35.6
Min nTPM: 26.6
Sample A Female 30.3
Sample B Female 35.6
Sample C Male 34.7
Sample D Male 26.6
Subiculum
nTPM: 34.9
Samples: 4

Max nTPM: 41.8
Min nTPM: 29.6
Sample A Female 41.8
Sample B Female 34.3
Sample C Male 33.7
Sample D Male 29.6
Ventral hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 44.3
Min nTPM: 29.0
Sample A Female 34.4
Sample B Female 29.0
Sample C Male 44.3
Sample D Male 32.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 7.7
Min nTPM: 6.6
Sample A Male 7.7
Sample B Male 7.4
Sample C Female 6.6
Sample D Female 6.9
Hippocampal formation
nTPM: 9.0
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.6
Sample A Male 8.8
Sample B Male 8.7
Sample C Female 8.6
Sample D Female 9.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68744988 Antisense, RP_050210_01_A09, Mouse strain C57BL/6J (56 days, male) 1.6

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