HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.9 nTPM
HPA:41.9 nTPM
GTEx:34.2 nTPM
FANTOM5:47.8 Scaled Tags Per Million
Pig:12.4 nTPM
Mouse:36.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028900Antibody CAB002508
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.9
Sample id Sample description nTPM
Hippocampus
nTPM: 37.7
2529 Female, age 94, left hemisphere 41.3
1855 Male, age 76, left hemisphere 37.9
2148 Female, age 91, left hemisphere 37.7
1898 Male, age 80, left hemisphere 37.2
2621 Female, age 67, right hemisphere 36.3
1911 Female, age 85, right hemisphere 36.0
Dentate gyrus
nTPM: 36.2
2530 Female, age 94, left hemisphere 53.4
2010 Male, age 76, both hemispheres 40.7
2246 Female, age 85, both hemispheres 33.7
2528 Male, age 74, both hemispheres 33.4
1927 Female, age 91, both hemispheres 28.5
2531 Female, age 67, both hemispheres 27.5
Entorhinal gyrus
nTPM: 37.6
2117 Female, age 91, right hemisphere 53.5
2764 Male, age 80, right hemisphere 44.4
2686 Male, age 75, right hemisphere 34.9
2613 Female, age 94, left hemisphere 34.1
1938 Female, age 85, left hemisphere 30.5
1787 Male, age 76, left hemisphere 28.3
Hippocampus, CA1
nTPM: 34.3
2527 Male, age 74, both hemispheres 39.5
2082 Female, age 91, right hemisphere 38.7
1873 Female, age 85, both hemispheres 35.5
2749 Male, age 80, left hemisphere 29.8
2045 Male, age 76, both hemispheres 28.1
Hippocampus, CA2
nTPM: 38.2
1963 Male, age 80, left hemisphere 48.4
2249 Male, age 74, both hemispheres 48.3
2113 Female, age 91, right hemisphere 39.3
2437 Female, age 94, left hemisphere 37.8
1940 Female, age 85, left hemisphere 32.9
1892 Male, age 76, both hemispheres 22.7
Hippocampus, CA3
nTPM: 31.9
2436 Male, age 74, both hemispheres 41.9
1891 Female, age 85, both hemispheres 40.3
2861 Female, age 67, both hemispheres 33.0
1867 Male, age 76, both hemispheres 28.8
2620 Female, age 94, left hemisphere 24.8
2137 Male, age 80, left hemisphere 22.2
Parahippocampal cortex
nTPM: 33.3
2692 Male, age 74, both hemispheres 46.9
1990 Female, age 91, right hemisphere 37.5
2018 Male, age 76, both hemispheres 36.7
1850 Male, age 80, both hemispheres 33.6
2532 Female, age 72, left hemisphere 32.0
2250 Female, age 67, right hemisphere 31.9
1933 Female, age 85, both hemispheres 31.8
2622 Female, age 67, right hemisphere 29.0
2245 Female, age 91, both hemispheres 28.3
2693 Female, age 94, both hemispheres 25.6
Perirhinal gyrus
nTPM: 24.7
1847 Female, age 91, left hemisphere 29.4
2848 Male, age 76, right hemisphere 24.7
1794 Male, age 80, right hemisphere 24.3
2521 Female, age 94, right hemisphere 22.8
1841 Female, age 85, right hemisphere 22.3
Subiculum
nTPM: 41.9
2042 Male, age 76, both hemispheres 46.8
1901 Male, age 80, both hemispheres 46.7
2619 Male, age 74, both hemispheres 42.4
2729 Female, age 91, right hemisphere 41.8
2438 Female, age 94, left hemisphere 38.1
1977 Female, age 85, both hemispheres 35.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.2
Samples: 197

Max nTPM: 93.5
Min nTPM: 7.9
Std nTPM: 13.6
Median nTPM: 31.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 93.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 80.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 75.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 68.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 67.2
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 65.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 63.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 62.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 62.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 58.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 58.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.8
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 37.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 17.0
Min nTPM: 6.7
Sample A Female 17.0
Sample B Female 9.4
Sample C Male 16.6
Sample D Male 6.7
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.5
Sample A Female 10.7
Sample B Female 10.4
Sample C Male 11.0
Sample D Male 6.5
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 10.6
Min nTPM: 5.8
Sample A Female 9.4
Sample B Female 5.8
Sample C Male 9.6
Sample D Male 10.6
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 16.1
Min nTPM: 7.0
Sample A Female 10.6
Sample B Female 7.0
Sample C Male 16.1
Sample D Male 12.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 21.9
Min nTPM: 12.5
Sample A Male 21.9
Sample B Male 15.6
Sample C Female 18.7
Sample D Female 12.5
Hippocampal formation
nTPM: 36.1
Samples: 4

Max nTPM: 51.0
Min nTPM: 21.8
Sample A Male 21.8
Sample B Male 27.8
Sample C Female 51.0
Sample D Female 43.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69735676 Antisense, RP_050503_03_C07, Mouse strain C57BL/6J (56 days, male) 0.9

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