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CD82
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TISSUE PRIMARY DATA MEDULLA OBLONGATA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

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No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
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Consensus:58.5 nTPM
HPA:58.5 nTPM
FANTOM5:55.1 Scaled Tags Per Million
Pig:22.1 nTPM
Allen mouse:1.7 Expression energy

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max nTPM 58.5
Sample id Sample description nTPM
Area postrema
nTPM: 58.1
2799 Male, age 61, both hemispheres 66.9
2306 Male, age 80, both hemispheres 57.0
2054 Male, age 76, both hemispheres 50.5
Cuneate nuclei
nTPM: 49.9
2376 Male, age 61, both hemispheres 58.6
2381 Male, age 80, both hemispheres 48.9
2131 Male, age 76, both hemispheres 42.3
Dorsal medullary reticular nucleus
nTPM: 51.0
2373 Male, age 61, both hemispheres 53.3
2088 Male, age 76, both hemispheres 51.1
2040 Female, age 85, both hemispheres 48.7
Dorsal motor vagal complex
nTPM: 43.8
2185 Male, age 76, both hemispheres 52.3
2797 Male, age 61, both hemispheres 50.7
2643 Male, age 74, both hemispheres 47.7
2000 Male, age 74, unknown 42.2
2133 Female, age 91, both hemispheres 42.2
2844 Male, age 55, unknown 41.8
2807 Female, age 85, both hemispheres 37.9
2813 Female, age 72, unknown 35.6
Gigantocellular reticular nuclei, medullary
nTPM: 46.8
2022 Male, age 76, right hemisphere 53.3
2387 Female, age 91, both hemispheres 52.8
2314 Male, age 61, both hemispheres 48.0
1876 Female, age 85, both hemispheres 44.7
2310 Male, age 80, both hemispheres 44.5
2462 Male, age 74, both hemispheres 37.7
Gigantocellular reticular nuclei, pars
nTPM: 42.3
2084 Female, age 85, both hemispheres 47.2
2336 Male, age 61, both hemispheres 46.7
2706 Male, age 80, both hemispheres 42.3
2330 Male, age 80, both hemispheres 41.1
2168 Male, age 76, both hemispheres 34.4
Inferior olive
nTPM: 51.5
2085 Female, age 85, both hemispheres 66.3
2628 Female, age 91, both hemispheres 54.5
2379 Male, age 80, both hemispheres 48.2
2178 Male, age 61, both hemispheres 47.1
2563 Male, age 74, both hemispheres 41.3
Lateral medullary reticular nucleus
nTPM: 45.2
2852 Male, age 80, both hemispheres 50.1
2190 Female, age 85, both hemispheres 49.6
2044 Male, age 76, both hemispheres 47.8
2804 Female, age 91, both hemispheres 47.6
2374 Male, age 61, both hemispheres 43.2
2305 Male, age 74, both hemispheres 33.2
Medial vestibular nucleus
nTPM: 47.2
2803 Female, age 91, both hemispheres 54.3
2624 Male, age 61, both hemispheres 52.6
2093 Male, age 80, both hemispheres 49.3
2134 Male, age 76, both hemispheres 44.6
2743 Female, age 85, both hemispheres 42.8
2801 Male, age 74, both hemispheres 39.5
Motor hypoglossal nucleus
nTPM: 41.5
2277 Male, age 76, both hemispheres 47.4
2125 Female, age 91, both hemispheres 44.6
2182 Male, age 80, both hemispheres 42.7
2132 Female, age 85, both hemispheres 40.2
2461 Male, age 61, both hemispheres 32.7
Nucleus ambiguus
nTPM: 51.3
2071 Male, age 76, both hemispheres 52.6
2096 Female, age 85, both hemispheres 50.0
Nucleus cuneatus
nTPM: 50.6
2380 Male, age 80, both hemispheres 54.8
2562 Male, age 61, both hemispheres 54.5
2805 Female, age 91, both hemispheres 51.5
2808 Female, age 85, both hemispheres 48.5
2100 Male, age 76, both hemispheres 47.6
2564 Male, age 74, both hemispheres 47.0
Nucleus gracilis
nTPM: 51.1
2382 Male, age 80, both hemispheres 58.8
2299 Female, age 85, both hemispheres 52.8
2627 Male, age 74, both hemispheres 41.7
Nucleus raphe magnus
nTPM: 37.6
2328 Male, age 80, both hemispheres 45.0
2459 Female, age 91, both hemispheres 41.4
2051 Male, age 76, both hemispheres 39.0
2455 Male, age 74, both hemispheres 35.2
2160 Male, age 61, both hemispheres 33.4
2172 Female, age 85, both hemispheres 31.8
Nucleus raphe obscurus
nTPM: 48.8
2845 Female, age 85, midline 50.4
2800 Male, age 61, midline 50.2
2142 Male, age 76, midline 45.7
Nucleus raphe pallidus
nTPM: 39.2
1924 Male, age 61, midline 40.4
2183 Male, age 80, midline 38.7
2145 Male, age 76, midline 38.4
Nucleus tractus solitarii
nTPM: 38.8
2656 Male, age 76, both hemispheres 53.2
2191 Female, age 85, both hemispheres 42.7
2307 Male, age 80, both hemispheres 34.4
2144 Female, age 91, right hemisphere 24.9
Parvicellular reticular nuclei
nTPM: 43.0
2119 Male, age 80, both hemispheres 45.5
2095 Male, age 76, both hemispheres 44.5
2558 Male, age 74, both hemispheres 39.0
Parvicellular reticular nuclei, medullary
nTPM: 46.5
2181 Male, age 80, left hemisphere 49.5
2091 Female, age 85, both hemispheres 48.8
2189 Female, age 91, both hemispheres 41.1
Peritrigeminal nucleus
nTPM: 43.7
2136 Male, age 76, both hemispheres 48.9
2067 Female, age 85, both hemispheres 44.2
2179 Male, age 61, both hemispheres 37.9
Prepositus hypoglossal nucleus
nTPM: 42.5
2855 Female, age 85, right hemisphere 43.2
2086 Male, age 80, both hemispheres 41.9
Spinal trigeminal nucleus, caudal
nTPM: 46.2
2308 Male, age 80, both hemispheres 48.5
2642 Male, age 74, both hemispheres 45.8
2390 Female, age 91, both hemispheres 45.7
2447 Male, age 76, both hemispheres 45.6
2312 Male, age 61, both hemispheres 45.2
Spinal trigeminal nucleus, interpolar
nTPM: 47.0
2625 Male, age 61, both hemispheres 51.0
2386 Female, age 85, both hemispheres 49.7
2389 Female, age 91, both hemispheres 46.7
2066 Male, age 76, right hemisphere 44.0
2033 Male, age 80, both hemispheres 43.4
Spinal vestibular nucleus
nTPM: 52.0
2748 Male, age 76, both hemispheres 60.1
2806 Female, age 85, both hemispheres 53.0
2796 Male, age 61, both hemispheres 52.4
2384 Male, age 74, both hemispheres 51.9
2186 Female, age 91, both hemispheres 47.3
2780 Male, age 80, both hemispheres 47.3
Ventral medullary reticular nucleus
nTPM: 58.5
2372 Male, age 61, both hemispheres 62.2
2060 Male, age 76, both hemispheres 54.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 43.0
2118 Male, age 80, both hemispheres 47.3
1986 Male, age 76, both hemispheres 46.2
2302 Female, age 91, both hemispheres 43.0
2741 Female, age 85, both hemispheres 40.0
2180 Male, age 61, both hemispheres 38.7

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 55.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 55.1
FF:10174-103C3 60 years, female 79.5
FF:10038-101F2 18-64 years, mixed 55.5
FF:10155-103A2 76 years, female 30.2

MEDULLA OBLONGATA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 22.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 22.1
Samples: 4

Max nTPM: 25.8
Min nTPM: 18.2
Sample A Female 18.2
Sample B Female 19.6
Sample C Male 25.8
Sample D Male 24.7

MEDULLA OBLONGATA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.7
69735676 Antisense, RP_050503_03_C07, Mouse strain C57BL/6J (56 days, male) 1.7

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