COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:2.9 nTPM
HPA:2.2 nTPM
GTEx:2.9 nTPM
FANTOM5:7.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - Antibody stainingi
Antibody HPA031775Antibody HPA031777
Endothelial cells LowHigh
Glandular cells MediumHigh
Peripheral nerve/ganglion MediumMedium



COLON - HPA RNA-seqi
Average nTPM 2.2
overview
Male, age 54 		Colon sample 67
nTPM: 3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 1.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 2.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 2.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 1.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 2.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 1.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 2.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 1.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 2.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 2.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 2.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 2.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 2.9
Samples: 373

Max nTPM: 6.6
Min nTPM: 0.8
Std nTPM: 0.8
Median nTPM: 2.9
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 6.6
GTEX-14PN3-1926-SM-6EU1Y 60-69 years, female 5.7
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 5.5
GTEX-1PBJI-2526-SM-E6CP4 20-29 years, female 5.2
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 5.1
GTEX-1HSMQ-2526-SM-A9SMK 50-59 years, male 5.1
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 5.0
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 4.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 4.9
GTEX-YF7O-1626-SM-5IFII 50-59 years, male 4.9
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 4.9
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Colon - Transverse
Average nTPM: 2.2
Samples: 406

Max nTPM: 5.2
Min nTPM: 0.7
Std nTPM: 0.8
Median nTPM: 2.1
GTEX-11GSP-1626-SM-5986N 60-69 years, female 5.2
GTEX-1GMR3-2826-SM-9WPOG 40-49 years, male 4.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 4.7
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 4.5
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 4.5
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 4.5
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 4.4
GTEX-1GL5R-2426-SM-7MXV1 50-59 years, male 4.4
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 4.4
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 4.4
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 4.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 7.5
FF:10014-101C5 62,83,84 years, mixed 7.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.