ATRX

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:12.2 FPKM
GTEx:6.6 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Medium
Chondrocytes:Medium
Fibroblasts:High
Peripheral nerve:High

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001906

 

Antibody CAB009372

 

Antibody CAB068176

 

Adipocytes

High   Medium   High  

Chondrocytes

Not available   Not available   Medium  

Fibroblasts

High   High   Low  

Peripheral nerve

Not available   High   High  
     
     
     

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:High
Chondrocytes:Not available
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA001906

 

Antibody CAB009372

 

Antibody CAB068176

 

Adipocytes

High   High   Low  

Chondrocytes

Not available   Not available   Not available  

Fibroblasts

High   Not available   Medium  

Peripheral nerve

Not available   Not available   Medium  
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

12.2

N/A Female, age 80
Sample 1
FPKM: 12.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 13.8
N/A Female, age 57
Sample 3
FPKM: 12.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 11.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 10.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

6.6

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 7.1
Samples: 350

Max RPKM: 12.5
Min RPKM: 3.8
Std RPKM: 1.3
Median RPKM: 7.1
GTEX-TSE9-0226-SM-3DB84 12.5
GTEX-14C5O-0226-SM-5SI6O 11.7
GTEX-SNMC-1326-SM-2XCFK 10.7
GTEX-NFK9-0326-SM-3MJGV 10.6
GTEX-O5YT-0226-SM-32PK5 10.5
GTEX-11WQC-2426-SM-5EQKQ 10.5
GTEX-12WSA-0326-SM-5BC6I 10.3
GTEX-ZEX8-2326-SM-5S2MN 10.3
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 6.2
Samples: 227

Max RPKM: 10.7
Min RPKM: 1.5
Std RPKM: 1.5
Median RPKM: 6.1
GTEX-11NV4-1426-SM-5BC4W 10.7
GTEX-11OF3-0826-SM-5BC51 9.9
GTEX-113JC-0726-SM-5GZZR 9.8
GTEX-WFJO-1026-SM-3GIKL 9.7
GTEX-ZAB5-1126-SM-5Q5AD 9.3
GTEX-11ZTS-1326-SM-5EQMA 9.2
GTEX-145LU-1226-SM-5LU9B 9.2
GTEX-YECK-1426-SM-5IFHE 9.0
Show all