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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:20.4 nTPM
HPA:20.4 nTPM
GTEx:8.5 nTPM
FANTOM5:121.5 Scaled Tags Per Million
Pig:41.0 nTPM
Mouse:31.2 nTPM
Allen mouse:8.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001906Antibody CAB009372Antibody CAB068176
Glial cells MediumLowNot detected
Neuronal cells HighHighMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 20.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 15.6
2846 Female, age 79, unknown 18.2
2481 Female, age 94, left hemisphere 17.2
2290 Female, age 72, unknown 16.5
1857 Female, age 85, left hemisphere 16.4
2288 Male, age 75, left hemisphere 15.5
1854 Male, age 80, left hemisphere 13.8
1781 Male, age 74, unknown 13.7
2289 Male, age 61, right hemisphere 13.3
Claustrum
nTPM: 17.4
1956 Male, age 74, unknown 20.2
2491 Male, age 75, both hemispheres 20.0
2198 Male, age 80, both hemispheres 19.3
2196 Female, age 79, unknown 18.9
2392 Female, age 94, both hemispheres 18.6
2568 Male, age 61, both hemispheres 16.3
2284 Female, age 91, both hemispheres 15.8
2292 Female, age 85, both hemispheres 15.5
2645 Female, age 72, unknown 11.7
Globus pallidus, externus
nTPM: 16.2
2395 Male, age 75, both hemispheres 20.2
2567 Female, age 72, unknown 17.9
1996 Male, age 80, right hemisphere 15.0
2772 Female, age 79, unknown 14.0
2646 Male, age 61, right hemisphere 13.6
Globus pallidus, internus
nTPM: 16.0
2483 Female, age 94, right hemisphere 20.5
2287 Male, age 75, right hemisphere 18.3
2778 Female, age 91, both hemispheres 18.0
2111 Female, age 85, right hemisphere 15.4
2566 Female, age 72, unknown 14.0
2037 Male, age 80, right hemisphere 13.2
1818 Male, age 74, unknown 12.7
Nucleus accumbens
nTPM: 16.7
2824 Male, age 61, right hemisphere 19.6
2391 Female, age 94, left hemisphere 18.1
2698 Female, age 72, unknown 18.1
2286 Male, age 75, left hemisphere 16.7
1806 Female, age 85, left hemisphere 16.4
1856 Female, age 91, right hemisphere 16.2
1783 Male, age 74, unknown 15.3
2732 Male, age 80, right hemisphere 13.3
Nucleus basalis of Meynert
nTPM: 16.4
2393 Male, age 80, right hemisphere 17.4
2484 Female, age 94, left hemisphere 17.1
2569 Male, age 61, both hemispheres 16.0
2821 Male, age 75, both hemispheres 15.3
Nucleus of the diagonal band
nTPM: 20.4
1812 Female, age 91, both hemispheres 21.8
2029 Male, age 61, right hemisphere 21.2
2775 Male, age 80, right hemisphere 21.2
2195 Female, age 85, both hemispheres 19.1
1979 Male, age 74, unknown 18.9
Olfactory tubercle
nTPM: 17.6
1846 Male, age 80, right hemisphere 18.9
2487 Female, age 94, left hemisphere 17.3
1998 Female, age 91, both hemispheres 17.0
2856 Male, age 75, right hemisphere 17.0
Putamen
nTPM: 17.0
2647 Male, age 75, left hemisphere 21.8
2482 Female, age 94, left hemisphere 19.7
1838 Male, age 80, right hemisphere 17.7
1937 Female, age 91, right hemisphere 17.7
1829 Male, age 74, unknown 16.6
2466 Female, age 79, unknown 14.1
2489 Female, age 72, unknown 11.5
Septal nuclei
nTPM: 16.6
2031 Female, age 72, unknown 22.5
1960 Male, age 74, unknown 19.0
2629 Female, age 94, right hemisphere 17.7
2009 Female, age 91, both hemispheres 16.4
2199 Male, age 80, right hemisphere 15.2
2059 Female, age 85, both hemispheres 13.9
2394 Male, age 61, left hemisphere 11.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 8.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 8.2
Samples: 246

Max nTPM: 17.1
Min nTPM: 5.0
Std nTPM: 1.4
Median nTPM: 8.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 17.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 12.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 12.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 12.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 11.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 11.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 11.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 11.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 10.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 10.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 10.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 10.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 10.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 10.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 10.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 10.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 10.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 10.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 10.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 10.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 9.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 9.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 9.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 9.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 9.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 9.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 9.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 9.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 9.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 9.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 9.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 9.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 9.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 9.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 9.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 9.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 9.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 9.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 9.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 9.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 9.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 9.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 9.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 9.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 9.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 9.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 9.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 9.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 9.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 9.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 9.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 9.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 9.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 9.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 9.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 9.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 9.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 8.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 8.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 8.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 8.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 8.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 8.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 8.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 8.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 8.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 8.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 8.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 8.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 8.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 8.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 8.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 8.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 8.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 8.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 8.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 8.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 8.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 8.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 8.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 8.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 8.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 8.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 8.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 8.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 8.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 8.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 8.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 8.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 8.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 8.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 8.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 8.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 8.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 8.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 8.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 8.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 8.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 8.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 8.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 8.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 8.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 8.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 8.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 8.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 8.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 8.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 8.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 8.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 8.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 8.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 8.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 8.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 7.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 7.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 7.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 7.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 7.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 7.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 7.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 7.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 7.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 7.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 7.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 7.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 7.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 7.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 7.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 7.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 7.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 7.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 7.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 7.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 7.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 7.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 7.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 7.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 7.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 7.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 7.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 7.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 7.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 7.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 7.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 7.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 7.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 7.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 7.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 7.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 7.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 7.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 7.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 7.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 7.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 7.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 7.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 7.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 7.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 7.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 7.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 7.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 7.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 7.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 7.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 7.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 7.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 7.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 7.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 7.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 7.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 7.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 7.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 7.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 7.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 7.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 7.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 7.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 7.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 7.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 7.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 6.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 6.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 6.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 6.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 6.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 6.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 6.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 6.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 6.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 6.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 6.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 6.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 6.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 6.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 6.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 6.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 6.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 6.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 6.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 6.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 6.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 6.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 6.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 6.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 6.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 6.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 6.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 6.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 6.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 6.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 6.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 6.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 6.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 6.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 6.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 6.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 6.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 6.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 6.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 5.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 5.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 5.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 5.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 5.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 8.5
Samples: 246

Max nTPM: 16.9
Min nTPM: 4.9
Std nTPM: 1.5
Median nTPM: 8.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 13.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 13.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 12.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 12.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 12.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 12.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 12.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 11.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 11.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 11.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 11.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 11.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 11.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 11.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 11.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 11.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 11.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 11.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 10.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 10.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 10.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 10.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 10.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 10.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 10.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 10.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 10.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 10.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 10.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 10.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 10.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 10.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 10.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 10.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 10.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 9.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 9.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 9.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 9.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 9.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 9.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 9.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 9.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 9.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 9.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 9.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 9.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 9.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 9.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 9.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 9.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 9.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 9.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 9.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 9.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 9.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 9.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 9.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 9.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 9.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 9.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 9.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 9.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 9.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 9.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 9.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 9.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 9.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 9.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 9.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 9.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 9.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 9.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 9.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 9.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 9.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 9.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 8.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 8.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 8.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 8.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 8.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 8.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 8.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 8.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 8.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 8.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 8.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 8.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 8.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 8.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 8.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 8.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 8.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 8.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 8.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 8.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 8.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 8.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 8.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 8.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 8.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 8.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 8.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 8.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 8.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 8.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 8.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 8.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 8.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 8.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 8.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 8.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 8.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 8.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 8.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 8.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 8.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 8.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 8.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 8.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 8.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 8.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 8.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 8.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 8.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 8.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 8.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 8.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 8.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 8.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 8.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 8.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 8.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 8.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 8.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 8.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 8.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 8.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 8.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 8.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 8.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 8.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 8.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 7.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 7.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 7.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 7.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 7.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 7.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 7.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 7.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 7.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 7.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 7.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 7.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 7.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 7.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 7.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 7.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 7.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 7.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 7.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 7.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 7.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 7.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 7.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 7.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 7.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 7.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 7.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 7.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 7.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 7.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 7.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 7.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 7.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 7.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 7.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 7.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 7.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 7.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 7.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 7.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 7.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 7.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 7.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 7.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 7.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 7.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 7.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 7.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 7.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 7.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 7.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 7.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 7.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 7.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 7.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 7.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 7.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 7.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 7.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 7.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 7.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 7.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 7.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 7.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 6.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 6.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 6.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 6.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 6.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 6.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 6.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 6.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 6.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 6.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 6.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 6.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 6.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 6.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 6.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 6.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 6.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 6.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 6.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 6.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 6.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 6.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 6.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 6.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 6.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 6.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 5.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 5.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 5.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 4.9
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Brain - Putamen (basal ganglia)
Average nTPM: 7.8
Samples: 205

Max nTPM: 11.6
Min nTPM: 4.8
Std nTPM: 1.3
Median nTPM: 7.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 11.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 11.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 11.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 11.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 10.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 10.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 10.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 10.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 10.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 10.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 10.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 10.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 9.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 9.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 9.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 9.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 9.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 9.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 9.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 9.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 9.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 9.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 9.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 9.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 9.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 9.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 9.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 9.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 8.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 8.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 8.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 8.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 8.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 8.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 8.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 8.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 8.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 8.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 8.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 8.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 8.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 8.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 8.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 8.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 8.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 8.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 8.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 8.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 8.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 8.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 8.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 8.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 8.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 8.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 8.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 8.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 8.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 8.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 8.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 8.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 8.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 8.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 8.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 8.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 7.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 7.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 7.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 7.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 7.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 7.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 7.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 7.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 7.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 7.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 7.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 7.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 7.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 7.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 7.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 7.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 7.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 7.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 7.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 7.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 7.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 7.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 7.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 7.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 7.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 7.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 7.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 7.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 7.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 7.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 7.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 7.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 7.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 7.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 7.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 7.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 7.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 7.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 7.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 7.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 7.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 7.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 7.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 7.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 7.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 7.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 7.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 7.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 7.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 7.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 7.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 7.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 7.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 6.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 6.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 6.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 6.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 6.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 6.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 6.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 6.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 6.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 6.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 6.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 6.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 6.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 6.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 6.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 6.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 6.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 6.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 6.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 6.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 6.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 6.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 6.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 6.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 6.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 6.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 6.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 6.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 6.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 6.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 6.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 6.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 6.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 6.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 5.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 5.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 5.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 5.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 5.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 5.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 5.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 5.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 5.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 5.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 5.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 121.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.3
FF:10164-103B2 76 years, female 82.3
Globus pallidus
Scaled Tags Per Million: 70.5
FF:10161-103A8 76 years, female 80.2
FF:10175-103C4 60 years, female 60.7
Nucleus accumbens
Scaled Tags Per Million: 49.2
FF:10037-101F1 23-56 years, mixed 49.2
Putamen
Scaled Tags Per Million: 121.5
FF:10176-103C5 60 years, female 121.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 41.0
Pig sample Sample description nTPM
Caudate
nTPM: 34.0
Samples: 4

Max nTPM: 37.2
Min nTPM: 29.2
Sample A Female 37.2
Sample B Female 29.2
Sample C Male 34.9
Sample D Male 34.6
Putamen
nTPM: 41.0
Samples: 4

Max nTPM: 57.3
Min nTPM: 33.2
Sample A Female 33.2
Sample B Female 35.9
Sample C Male 57.3
Sample D Male 37.5
Septum
nTPM: 32.6
Samples: 4

Max nTPM: 35.2
Min nTPM: 29.8
Sample A Female 32.9
Sample B Female 32.5
Sample C Male 35.2
Sample D Male 29.8
Ventral pallidum
nTPM: 32.6
Samples: 4

Max nTPM: 39.7
Min nTPM: 28.0
Sample A Female 39.7
Sample B Female 32.7
Sample C Male 28.0
Sample D Male 30.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 31.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 31.2
Samples: 4

Max nTPM: 33.7
Min nTPM: 28.9
Sample A Male 33.0
Sample B Male 29.2
Sample C Female 33.7
Sample D Female 28.9
Septum
nTPM: 20.8
Samples: 4

Max nTPM: 23.5
Min nTPM: 18.4
Sample A Male 23.5
Sample B Male 18.7
Sample C Female 18.4
Sample D Female 22.7
Ventral forebrain
nTPM: 29.2
Samples: 4

Max nTPM: 33.5
Min nTPM: 23.5
Sample A Male 33.5
Sample B Male 28.2
Sample C Female 23.5
Sample D Female 31.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.5
69527018 Antisense, RP_050421_02_B04, Mouse strain C57BL/6J (56 days, male) 11.1
74881733 Antisense, RP_060315_04_D01, Mouse strain C57BL/6J (56 days, male) 5.8
Pallidum
Expression energy: 6.5
69527018 Antisense, RP_050421_02_B04, Mouse strain C57BL/6J (56 days, male) 8.2
74881733 Antisense, RP_060315_04_D01, Mouse strain C57BL/6J (56 days, male) 4.8

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