ATRX

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:9.2 FPKM
GTEx:5.8 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:High
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001906

 

Antibody CAB009372

 

Antibody CAB068176

 

Fibroblasts

High   High   Medium  

Keratinocytes

High   Medium   Medium  

Langerhans

High   Medium   Medium  

Melanocytes

High   Medium   Low  
     
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001906

 

Antibody CAB009372

 

Antibody CAB068176

 

Epidermal cells

High   Medium   Medium  
        
        
        
     
     
     

SKIN - HPA RNA-seq

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Average FPKM

9.2

overview Female, age 34
Sample 1
FPKM: 8.8
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 11.2
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 7.6

SKIN - GTEx RNA-seq

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Average RPKM

5.8

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 5.8
Samples: 250

Max RPKM: 12
Min RPKM: 2.7
Std RPKM: 1.2
Median RPKM: 5.7
GTEX-ZVT2-0126-SM-5GIDQ 12.0
GTEX-12WSC-2826-SM-5BC5Y 9.7
GTEX-13VXU-0626-SM-5L3F9 9.3
GTEX-147JS-0226-SM-5S2U9 9.3
GTEX-ZVE2-2826-SM-5GU51 9.0
GTEX-ZVTK-0226-SM-51MRG 8.5
GTEX-ZVT4-2426-SM-5GIEI 8.3
GTEX-13X6J-0626-SM-5LU5F 8.3
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 5.8
Samples: 357

Max RPKM: 11.2
Min RPKM: 1.5
Std RPKM: 1.4
Median RPKM: 5.7
GTEX-TSE9-0126-SM-3DB83 11.2
GTEX-WFG8-2226-SM-3GIL9 10.9
GTEX-P44H-0226-SM-2XCEU 9.5
GTEX-12WSC-0126-SM-5EQ4P 9.4
GTEX-14C5O-0126-SM-5SI6N 9.3
GTEX-11EQ9-2426-SM-5HL5T 9.2
GTEX-131XG-2626-SM-5KM17 9.1
GTEX-ZXG5-0126-SM-5GIEU 9.1
Show all