HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:19.8 nTPM
HPA:19.8 nTPM
GTEx:25.3 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Mouse:34.4 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039964
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.8
Sample id Sample description nTPM
Hippocampus
nTPM: 16.9
1898 Male, age 80, left hemisphere 23.7
2621 Female, age 67, right hemisphere 16.6
1855 Male, age 76, left hemisphere 16.2
1911 Female, age 85, right hemisphere 16.0
2529 Female, age 94, left hemisphere 14.4
2148 Female, age 91, left hemisphere 14.2
Dentate gyrus
nTPM: 16.1
1927 Female, age 91, both hemispheres 20.4
2010 Male, age 76, both hemispheres 19.3
2530 Female, age 94, left hemisphere 16.9
2246 Female, age 85, both hemispheres 15.4
2531 Female, age 67, both hemispheres 12.6
2528 Male, age 74, both hemispheres 12.0
Entorhinal gyrus
nTPM: 14.9
1938 Female, age 85, left hemisphere 17.6
2764 Male, age 80, right hemisphere 17.0
1787 Male, age 76, left hemisphere 14.9
2613 Female, age 94, left hemisphere 14.5
2686 Male, age 75, right hemisphere 12.8
2117 Female, age 91, right hemisphere 12.5
Hippocampus, CA1
nTPM: 19.8
2749 Male, age 80, left hemisphere 33.7
1873 Female, age 85, both hemispheres 21.9
2527 Male, age 74, both hemispheres 15.2
2045 Male, age 76, both hemispheres 15.1
2082 Female, age 91, right hemisphere 13.1
Hippocampus, CA2
nTPM: 17.8
1963 Male, age 80, left hemisphere 25.6
1892 Male, age 76, both hemispheres 24.4
2437 Female, age 94, left hemisphere 15.0
2249 Male, age 74, both hemispheres 14.9
1940 Female, age 85, left hemisphere 13.8
2113 Female, age 91, right hemisphere 13.2
Hippocampus, CA3
nTPM: 17.7
2137 Male, age 80, left hemisphere 28.2
1867 Male, age 76, both hemispheres 18.3
2620 Female, age 94, left hemisphere 17.3
1891 Female, age 85, both hemispheres 16.4
2436 Male, age 74, both hemispheres 14.8
2861 Female, age 67, both hemispheres 11.4
Parahippocampal cortex
nTPM: 14.7
1850 Male, age 80, both hemispheres 20.4
1933 Female, age 85, both hemispheres 17.5
2250 Female, age 67, right hemisphere 15.6
1990 Female, age 91, right hemisphere 15.5
2018 Male, age 76, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.7
2532 Female, age 72, left hemisphere 13.9
2693 Female, age 94, both hemispheres 13.7
2692 Male, age 74, both hemispheres 11.7
2622 Female, age 67, right hemisphere 9.6
Perirhinal gyrus
nTPM: 17.8
1847 Female, age 91, left hemisphere 21.1
1794 Male, age 80, right hemisphere 18.5
1841 Female, age 85, right hemisphere 18.5
2521 Female, age 94, right hemisphere 16.1
2848 Male, age 76, right hemisphere 14.6
Subiculum
nTPM: 13.6
1901 Male, age 80, both hemispheres 18.2
1977 Female, age 85, both hemispheres 17.6
2042 Male, age 76, both hemispheres 15.4
2619 Male, age 74, both hemispheres 10.8
2729 Female, age 91, right hemisphere 10.5
2438 Female, age 94, left hemisphere 9.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.3
Samples: 197

Max nTPM: 63.7
Min nTPM: 10.0
Std nTPM: 9.9
Median nTPM: 23.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 59.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 52.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 51.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 45.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 44.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 44.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 44.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 44.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 43.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 43.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10169-103B7 60 years, female 41.8
FF:10153-102I9 76 years, female 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 29.0
Min nTPM: 22.7
Sample A Male 28.1
Sample B Male 29.0
Sample C Female 29.0
Sample D Female 22.7
Hippocampal formation
nTPM: 34.4
Samples: 4

Max nTPM: 38.9
Min nTPM: 31.7
Sample A Male 38.9
Sample B Male 34.3
Sample C Female 32.5
Sample D Female 31.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.