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TISSUE PRIMARY DATA WHITE MATTER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
WHITE MATTER - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:8.2 nTPM
HPA:8.2 nTPM
FANTOM5:0.0 Scaled Tags Per Million
Pig:0.0 nTPM
Mouse:0.0 nTPM

WHITE MATTER - HPA Brain RNA-seq
Max nTPM 8.2
Sample id Sample description nTPM
Angular gyrus (white matter)
nTPM: 6.5
1920 Male, age 76, both hemispheres 6.5
Anterior funiculus (white matter)
nTPM: 6.1
2193 Male, age 75, both hemispheres 6.3
2818 Female, age 79, both hemispheres 6.1
2734 Male, age 80, both hemispheres 6.0
2819 Male, age 47, both hemispheres 5.9
Area striata (white matter)
nTPM: 7.4
2258 Female, age 91, left hemisphere 7.4
Cerebellar white matter
nTPM: 6.2
2773 Female, age 85, right hemisphere 6.4
1864 Male, age 80, left hemisphere 6.3
2105 Male, age 74, right hemisphere 6.3
1837 Male, age 76, left hemisphere 6.2
1931 Female, age 91, left hemisphere 6.1
2174 Male, age 61, right hemisphere 6.0
Corpus callosum, genu (white matter)
nTPM: 6.1
1887 Male, age 76, left hemisphere 6.6
1849 Female, age 91, right hemisphere 6.3
1886 Female, age 67, right hemisphere 6.3
1885 Female, age 94, left hemisphere 6.0
1934 Male, age 61, right hemisphere 5.8
2771 Male, age 75, left hemisphere 5.7
Corpus callosum, splenium (white matter)
nTPM: 6.0
2238 Female, age 94, right hemisphere 6.2
2847 Female, age 67, right hemisphere 6.1
1946 Male, age 76, left hemisphere 5.9
2104 Male, age 75, left hemisphere 5.8
Dorsal funiculus (white matter)
nTPM: 6.2
2817 Male, age 47, both hemispheres 6.4
2128 Male, age 75, both hemispheres 6.2
2812 Male, age 66, both hemispheres 6.2
2064 Female, age 79, both hemispheres 6.1
2810 Male, age 90, both hemispheres 6.0
Lateral funiculus (white matter)
nTPM: 6.2
2099 Male, age 90, both hemispheres 6.5
2294 Male, age 66, both hemispheres 6.5
2192 Male, age 75, both hemispheres 6.1
2094 Female, age 79, both hemispheres 5.7
Occipital cortex (white matter)
nTPM: 7.3
2257 Female, age 67, both hemispheres 8.1
2259 Male, age 75, midline 6.4
Parahippocampal cortex (white matter)
nTPM: 6.9
2157 Female, age 91, both hemispheres 6.9
Parieto-temporal junction (white matter)
nTPM: 6.4
2121 Male, age 76, left hemisphere 6.7
2770 Female, age 91, right hemisphere 6.5
1999 Female, age 67, right hemisphere 6.3
2469 Male, age 75, right hemisphere 6.3
1935 Female, age 94, right hemisphere 6.2
2774 Male, age 61, right hemisphere 6.2
Somatomor cortex, precentral gyrus (white matter)
nTPM: 8.1
2439 Male, age 75, right hemisphere 8.1
Somatosensory cortex, postcentral gyrus, ventral (white matter)
nTPM: 8.2
2623 Male, age 75, right hemisphere 8.2
Temporal white matter
nTPM: 6.4
1801 Male, age 76, left hemisphere 6.7
2254 Male, age 75, right hemisphere 6.4
2523 Female, age 94, left hemisphere 6.4
2524 Female, age 85, left hemisphere 6.4
2736 Female, age 91, right hemisphere 6.2

WHITE MATTER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 0
FANTOM5 sample id Sample description Scaled Tags Per Million
Corpus callosum
Scaled Tags Per Million: 0.0
FF:10042-101F6 24-68 years, mixed 0.0

WHITE MATTER - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.0
Pig sample Sample description nTPM
Corpus callosum
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

WHITE MATTER - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 0.0
Mouse sample Sample description nTPM
Corpus callosum
nTPM: 0.0
Samples: 3

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample D Female 0.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.