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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:6.3 nTPM
GTEx:6.3 nTPM
FANTOM5:1.8 Scaled Tags Per Million

VAGINA - Annotated protein expression
Pending normal tissue analysis

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA037753
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 6.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 6.3
Samples: 156

Max nTPM: 22.1
Min nTPM: 0.0
Std nTPM: 5.0
Median nTPM: 5.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 22.1
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 19.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 18.0
GTEX-11I78-2026-SM-5987C 50-59 years, female 17.8
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 16.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 16.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 16.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 16.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 15.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 15.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 14.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 14.4
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 14.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 14.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 13.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 13.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 13.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 13.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 12.5
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 12.2
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 12.1
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 11.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 11.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 11.5
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 11.5
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 11.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 11.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 10.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 10.9
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 10.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 10.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 10.6
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 10.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 10.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 10.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 10.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 9.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 9.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 9.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 9.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 9.3
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 9.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 9.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 8.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 8.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 8.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 8.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 8.4
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 8.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 8.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 8.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 8.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 8.0
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 8.0
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 7.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 7.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 7.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 7.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 7.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 7.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 7.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 7.6
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 7.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 7.2
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 7.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 7.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 6.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 6.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 6.5
GTEX-1C475-0526-SM-793AC 40-49 years, female 6.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 6.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 6.4
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 6.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 6.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 6.1
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 5.9
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 5.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 5.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 5.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 5.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 5.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 5.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 5.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 5.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 5.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 5.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 5.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 5.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 5.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 4.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 4.8
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 4.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 4.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 4.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 4.6
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 4.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 4.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 4.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 4.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 4.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 4.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 4.0
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 3.9
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 3.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 3.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 3.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 3.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 3.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 3.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 2.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 1.5
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1.4
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1.4
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1.4
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 0.9
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 0.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 0.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 0.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 0.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 0.3
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 0.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 0.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 0.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 0.1
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 0.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 0.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 0.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 0.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 0.0
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 0.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 0.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 0.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 0.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 0.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 0.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 0.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 0.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 0.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 0.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 0.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 0.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 0.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 0.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 0.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1.8
FF:10204-103F6 68 years, female 1.8

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.