HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.9 nTPM
HPA:43.9 nTPM
GTEx:45.8 nTPM
FANTOM5:57.7 Scaled Tags Per Million
Pig:94.6 nTPM
Mouse:209.8 nTPM
Allen mouse:11.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008451Antibody CAB010164
Glial cells Not detectedMedium
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.9
Sample id Sample description nTPM
Hippocampus
nTPM: 38.5
1898 Male, age 80, left hemisphere 46.1
1855 Male, age 76, left hemisphere 42.9
2621 Female, age 67, right hemisphere 38.7
1911 Female, age 85, right hemisphere 38.5
2529 Female, age 94, left hemisphere 34.2
2148 Female, age 91, left hemisphere 30.6
Dentate gyrus
nTPM: 36.8
2010 Male, age 76, both hemispheres 47.5
1927 Female, age 91, both hemispheres 41.9
2530 Female, age 94, left hemisphere 41.3
2528 Male, age 74, both hemispheres 33.4
2246 Female, age 85, both hemispheres 33.1
2531 Female, age 67, both hemispheres 23.6
Entorhinal gyrus
nTPM: 33.6
1938 Female, age 85, left hemisphere 39.0
2117 Female, age 91, right hemisphere 36.5
1787 Male, age 76, left hemisphere 34.1
2764 Male, age 80, right hemisphere 31.6
2686 Male, age 75, right hemisphere 30.8
2613 Female, age 94, left hemisphere 29.5
Hippocampus, CA1
nTPM: 43.9
2749 Male, age 80, left hemisphere 78.5
1873 Female, age 85, both hemispheres 50.6
2527 Male, age 74, both hemispheres 36.1
2082 Female, age 91, right hemisphere 28.1
2045 Male, age 76, both hemispheres 26.3
Hippocampus, CA2
nTPM: 41.4
1963 Male, age 80, left hemisphere 67.6
1892 Male, age 76, both hemispheres 51.4
2249 Male, age 74, both hemispheres 35.5
1940 Female, age 85, left hemisphere 31.8
2113 Female, age 91, right hemisphere 31.6
2437 Female, age 94, left hemisphere 30.8
Hippocampus, CA3
nTPM: 34.1
2137 Male, age 80, left hemisphere 48.7
1891 Female, age 85, both hemispheres 39.2
1867 Male, age 76, both hemispheres 38.3
2436 Male, age 74, both hemispheres 32.0
2861 Female, age 67, both hemispheres 24.1
2620 Female, age 94, left hemisphere 22.2
Parahippocampal cortex
nTPM: 35.0
1850 Male, age 80, both hemispheres 42.9
1990 Female, age 91, right hemisphere 38.4
2692 Male, age 74, both hemispheres 36.4
1933 Female, age 85, both hemispheres 36.3
2532 Female, age 72, left hemisphere 35.2
2250 Female, age 67, right hemisphere 34.3
2693 Female, age 94, both hemispheres 33.0
2245 Female, age 91, both hemispheres 32.9
2018 Male, age 76, both hemispheres 31.4
2622 Female, age 67, right hemisphere 28.8
Perirhinal gyrus
nTPM: 37.1
1841 Female, age 85, right hemisphere 41.0
1847 Female, age 91, left hemisphere 38.2
1794 Male, age 80, right hemisphere 37.5
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 33.7
Subiculum
nTPM: 36.1
1901 Male, age 80, both hemispheres 41.7
2042 Male, age 76, both hemispheres 38.3
1977 Female, age 85, both hemispheres 36.5
2438 Female, age 94, left hemisphere 34.6
2619 Male, age 74, both hemispheres 33.5
2729 Female, age 91, right hemisphere 32.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.8
Samples: 197

Max nTPM: 88.1
Min nTPM: 20.4
Std nTPM: 12.6
Median nTPM: 42.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 88.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 86.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 80.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 80.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 78.0
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 75.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 74.9
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 72.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 71.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 71.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 70.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.7
FF:10153-102I9 76 years, female 86.1
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 94.0
Samples: 4

Max nTPM: 127.8
Min nTPM: 63.6
Sample A Female 127.8
Sample B Female 87.9
Sample C Male 96.8
Sample D Male 63.6
Entorhinal cortex
nTPM: 79.2
Samples: 4

Max nTPM: 86.6
Min nTPM: 73.2
Sample A Female 82.3
Sample B Female 86.6
Sample C Male 73.2
Sample D Male 74.5
Subiculum
nTPM: 67.2
Samples: 4

Max nTPM: 82.4
Min nTPM: 57.5
Sample A Female 82.4
Sample B Female 62.8
Sample C Male 57.5
Sample D Male 66.2
Ventral hippocampus
nTPM: 94.6
Samples: 4

Max nTPM: 126.3
Min nTPM: 58.0
Sample A Female 126.3
Sample B Female 58.0
Sample C Male 95.9
Sample D Male 98.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 209.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 165.7
Samples: 4

Max nTPM: 179.0
Min nTPM: 143.4
Sample A Male 168.9
Sample B Male 179.0
Sample C Female 171.3
Sample D Female 143.4
Hippocampal formation
nTPM: 209.8
Samples: 4

Max nTPM: 235.0
Min nTPM: 194.5
Sample A Male 235.0
Sample B Male 200.2
Sample C Female 209.3
Sample D Female 194.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.8
69012635 Antisense, RP_050309_01_B09, Mouse strain C57BL/6J (56 days, male) 12.1
72080144 Antisense, RP_051017_03_C09, Mouse strain C57BL/6J (56 days, male) 11.4

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The Human Protein Atlas

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