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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:15.5 nTPM
HPA:15.5 nTPM
GTEx:11.4 nTPM
FANTOM5:27.6 Scaled Tags Per Million
Pig:13.3 nTPM
Mouse:29.6 nTPM
Allen mouse:6.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA039722Antibody HPA040155
Glial cells Not detectedMedium
Neuronal cells MediumHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 9.8
1781 Male, age 74, unknown 11.8
2289 Male, age 61, right hemisphere 10.1
1854 Male, age 80, left hemisphere 9.9
2288 Male, age 75, left hemisphere 9.9
1857 Female, age 85, left hemisphere 9.6
2290 Female, age 72, unknown 9.4
2481 Female, age 94, left hemisphere 9.2
2846 Female, age 79, unknown 8.4
Claustrum
nTPM: 14.1
2568 Male, age 61, both hemispheres 16.5
2645 Female, age 72, unknown 15.5
2284 Female, age 91, both hemispheres 15.1
2198 Male, age 80, both hemispheres 15.0
2491 Male, age 75, both hemispheres 14.1
2292 Female, age 85, both hemispheres 13.9
2196 Female, age 79, unknown 12.7
1956 Male, age 74, unknown 11.9
2392 Female, age 94, both hemispheres 11.9
Globus pallidus, externus
nTPM: 14.2
2772 Female, age 79, unknown 16.4
2567 Female, age 72, unknown 16.3
2646 Male, age 61, right hemisphere 13.9
1996 Male, age 80, right hemisphere 13.0
2395 Male, age 75, both hemispheres 11.3
Globus pallidus, internus
nTPM: 12.9
2566 Female, age 72, unknown 15.6
1818 Male, age 74, unknown 13.7
2037 Male, age 80, right hemisphere 13.6
2287 Male, age 75, right hemisphere 13.4
2111 Female, age 85, right hemisphere 12.2
2778 Female, age 91, both hemispheres 10.9
2483 Female, age 94, right hemisphere 10.6
Nucleus accumbens
nTPM: 9.9
2732 Male, age 80, right hemisphere 11.2
2286 Male, age 75, left hemisphere 10.3
2698 Female, age 72, unknown 10.2
1806 Female, age 85, left hemisphere 10.0
2391 Female, age 94, left hemisphere 9.6
1783 Male, age 74, unknown 9.5
2824 Male, age 61, right hemisphere 9.5
1856 Female, age 91, right hemisphere 8.8
Nucleus basalis of Meynert
nTPM: 10.9
2569 Male, age 61, both hemispheres 14.4
2821 Male, age 75, both hemispheres 11.0
2484 Female, age 94, left hemisphere 9.5
2393 Male, age 80, right hemisphere 8.8
Nucleus of the diagonal band
nTPM: 14.8
2195 Female, age 85, both hemispheres 16.0
2775 Male, age 80, right hemisphere 15.8
2029 Male, age 61, right hemisphere 15.4
1812 Female, age 91, both hemispheres 14.0
1979 Male, age 74, unknown 12.8
Olfactory tubercle
nTPM: 15.5
2487 Female, age 94, left hemisphere 16.7
1998 Female, age 91, both hemispheres 15.5
1846 Male, age 80, right hemisphere 15.0
2856 Male, age 75, right hemisphere 14.9
Putamen
nTPM: 9.4
2647 Male, age 75, left hemisphere 12.0
1838 Male, age 80, right hemisphere 10.1
1937 Female, age 91, right hemisphere 9.4
2482 Female, age 94, left hemisphere 9.0
2489 Female, age 72, unknown 8.9
1829 Male, age 74, unknown 8.8
2466 Female, age 79, unknown 7.8
Septal nuclei
nTPM: 14.6
1960 Male, age 74, unknown 17.1
2394 Male, age 61, left hemisphere 16.0
2629 Female, age 94, right hemisphere 15.8
2059 Female, age 85, both hemispheres 14.9
2031 Female, age 72, unknown 13.6
2009 Female, age 91, both hemispheres 13.5
2199 Male, age 80, right hemisphere 11.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 11.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.8
Samples: 246

Max nTPM: 19.9
Min nTPM: 5.4
Std nTPM: 2.0
Median nTPM: 10.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 19.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 18.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 17.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 16.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 15.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 15.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 15.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 14.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 14.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 14.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 13.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 13.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 13.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 13.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 13.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 13.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 13.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 13.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 13.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 13.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 12.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 12.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 12.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 12.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 12.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 12.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 12.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 12.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 12.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 12.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 12.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 12.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 12.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 12.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 12.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 12.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 12.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 12.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 12.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 12.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 12.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 12.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 12.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 12.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 12.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 12.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 12.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 12.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 12.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 12.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 12.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 12.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 12.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 12.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 11.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 11.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 11.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 11.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 11.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 11.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 11.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 11.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 11.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 11.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 11.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 11.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 11.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 11.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 11.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 11.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 11.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 11.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 11.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 11.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 11.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 11.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 11.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 11.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 11.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 11.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 11.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 11.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 11.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 11.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 11.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 11.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 11.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 11.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 11.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 11.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 11.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 11.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 11.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 11.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 11.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 11.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 11.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 11.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 11.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 11.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 11.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 11.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 10.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 10.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 10.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 10.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 10.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 10.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 10.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 10.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 10.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 10.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 10.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 10.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 10.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 10.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 10.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 10.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 10.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 10.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 10.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 10.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 10.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 10.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 10.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 10.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 10.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 10.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 10.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 10.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 10.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 10.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 10.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 10.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 10.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 10.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 10.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 10.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 10.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 10.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 10.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 10.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 10.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 10.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 10.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 10.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 10.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 9.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 9.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 9.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 9.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 9.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 9.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 9.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 9.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 9.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 9.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 9.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 9.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 9.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 9.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 9.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 9.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 9.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 9.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 9.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 9.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 9.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 9.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 9.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 9.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 9.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 9.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 9.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 9.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 9.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 9.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 9.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 9.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 9.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 9.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 9.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 9.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 9.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 9.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 9.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 9.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 9.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 9.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 9.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 9.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 9.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 9.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 9.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 9.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 8.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 8.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 8.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 8.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 8.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 8.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 8.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 8.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 8.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 8.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 8.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 8.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 8.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 8.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 8.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 8.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 8.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 8.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 8.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 7.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 7.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 7.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 7.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 7.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 7.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 7.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 7.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 6.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 6.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 6.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 6.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 5.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 11.4
Samples: 246

Max nTPM: 28.6
Min nTPM: 6.8
Std nTPM: 2.8
Median nTPM: 11.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 28.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 27.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 22.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 21.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 18.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 18.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 17.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 17.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 17.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 16.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 16.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 16.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 16.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 16.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 16.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 15.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 15.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 15.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 15.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 14.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 14.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 14.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 14.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 14.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 14.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 14.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 14.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 14.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 13.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 13.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 13.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 13.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 13.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 13.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 13.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 13.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 13.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 13.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 13.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 13.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 13.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 12.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 12.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 12.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 12.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 12.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 12.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 12.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 12.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 12.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 12.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 12.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 12.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 12.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 12.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 12.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 12.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 12.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 12.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 12.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 12.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 12.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 12.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 12.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 12.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 12.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 12.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 12.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 12.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 12.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 12.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 12.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 12.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 12.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 11.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 11.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 11.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 11.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 11.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 11.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 11.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 11.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 11.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 11.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 11.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 11.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 11.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 11.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 11.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 11.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 11.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 11.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 11.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 11.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 11.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 11.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 11.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 11.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 11.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 11.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 11.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 11.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 11.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 11.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 11.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 11.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 11.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 11.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 11.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 11.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 11.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 11.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 11.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 11.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 11.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 11.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 11.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 11.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 11.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 11.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 11.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 11.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 11.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 10.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 10.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 10.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 10.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 10.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 10.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 10.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 10.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 10.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 10.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 10.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 10.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 10.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 10.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 10.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 10.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 10.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 10.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 10.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 10.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 10.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 10.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 10.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 10.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 10.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 10.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 10.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 10.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 10.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 10.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 10.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 10.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 10.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 10.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 10.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 10.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 10.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 10.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 10.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 10.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 10.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 10.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 10.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 10.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 10.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 10.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 10.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 10.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 10.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 10.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 10.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 9.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 9.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 9.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 9.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 9.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 9.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 9.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 9.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 9.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 9.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 9.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 9.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 9.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 9.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 9.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 9.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 9.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 9.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 9.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 9.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 9.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 9.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 9.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 9.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 9.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 9.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 9.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 9.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 9.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 9.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 9.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 9.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 9.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 9.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 9.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 9.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 9.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 8.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 8.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 8.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 8.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 8.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 8.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 8.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 8.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 8.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 8.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 8.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 8.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 8.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 8.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 8.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 8.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 8.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 8.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 8.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 8.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 8.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 8.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 8.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 7.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 7.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 7.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 7.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 7.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 7.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 6.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 6.8
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Brain - Putamen (basal ganglia)
Average nTPM: 10.5
Samples: 205

Max nTPM: 18.2
Min nTPM: 5.5
Std nTPM: 1.8
Median nTPM: 10.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 18.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 16.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 15.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 15.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 15.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 15.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 14.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 14.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 14.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 14.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 13.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 13.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 13.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 13.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 13.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 13.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 13.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 12.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 12.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 12.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 12.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 12.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 12.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 12.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 12.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 12.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 12.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 12.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 12.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 12.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 12.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 12.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 12.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 12.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 12.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 12.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 12.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 12.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 11.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 11.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 11.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 11.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 11.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 11.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 11.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 11.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 11.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 11.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 11.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 11.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 11.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 11.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 11.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 11.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 11.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 11.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 11.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 11.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 11.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 11.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 11.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 11.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 11.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 11.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 11.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 11.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 11.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 11.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 11.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 11.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 11.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 10.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 10.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 10.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 10.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 10.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 10.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 10.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 10.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 10.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 10.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 10.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 10.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 10.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 10.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 10.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 10.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 10.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 10.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 10.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 10.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 10.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 10.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 10.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 10.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 10.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 10.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 10.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 10.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 10.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 10.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 10.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 10.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 10.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 10.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 10.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 10.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 10.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 10.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 10.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 10.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 10.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 10.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 10.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 10.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 9.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 9.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 9.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 9.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 9.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 9.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 9.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 9.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 9.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 9.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 9.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 9.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 9.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 9.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 9.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 9.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 9.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 9.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 9.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 9.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 9.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 9.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 9.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 9.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 9.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 9.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 9.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 9.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 9.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 9.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 9.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 9.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 9.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 9.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 9.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 9.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 9.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 8.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 8.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 8.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 8.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 8.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 8.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 8.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 8.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 8.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 8.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 8.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 8.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 8.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 7.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 7.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 7.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 7.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 7.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 7.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 7.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 7.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 7.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 6.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 6.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 5.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 27.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 14.9
FF:10164-103B2 76 years, female 14.9
Globus pallidus
Scaled Tags Per Million: 22.0
FF:10161-103A8 76 years, female 25.1
FF:10175-103C4 60 years, female 18.9
Nucleus accumbens
Scaled Tags Per Million: 27.6
FF:10037-101F1 23-56 years, mixed 27.6
Putamen
Scaled Tags Per Million: 19.1
FF:10176-103C5 60 years, female 19.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 13.3
Pig sample Sample description nTPM
Caudate
nTPM: 11.2
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 12.1
Sample C Male 13.5
Sample D Male 10.5
Putamen
nTPM: 10.4
Samples: 4

Max nTPM: 11.6
Min nTPM: 9.3
Sample A Female 11.1
Sample B Female 9.3
Sample C Male 9.7
Sample D Male 11.6
Septum
nTPM: 12.0
Samples: 4

Max nTPM: 18.8
Min nTPM: 8.5
Sample A Female 10.4
Sample B Female 10.3
Sample C Male 18.8
Sample D Male 8.5
Ventral pallidum
nTPM: 13.3
Samples: 4

Max nTPM: 24.7
Min nTPM: 8.7
Sample A Female 8.7
Sample B Female 9.9
Sample C Male 24.7
Sample D Male 10.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 29.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 26.6
Samples: 4

Max nTPM: 32.0
Min nTPM: 23.0
Sample A Male 23.0
Sample B Male 23.9
Sample C Female 27.4
Sample D Female 32.0
Septum
nTPM: 27.2
Samples: 4

Max nTPM: 33.2
Min nTPM: 24.8
Sample A Male 33.2
Sample B Male 24.8
Sample C Female 24.9
Sample D Female 25.9
Ventral forebrain
nTPM: 29.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.4
Sample A Male 28.9
Sample B Male 31.7
Sample C Female 27.4
Sample D Female 30.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.0
71656816 Antisense, RP_050927_04_D05, Mouse strain C57BL/6J (56 days, male) 5.0
Pallidum
Expression energy: 6.5
71656816 Antisense, RP_050927_04_D05, Mouse strain C57BL/6J (56 days, male) 6.5

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