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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:28.8 nTPM
GTEx:28.8 nTPM
FANTOM5:33.4 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA039722Antibody HPA040155
Squamous epithelial cells Not detectedLow

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 28.8
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 28.8
Samples: 156

Max nTPM: 129.5
Min nTPM: 9.4
Std nTPM: 15.2
Median nTPM: 25.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 129.5
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 74.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 72.6
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 64.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 63.3
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 58.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 57.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 56.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 53.6
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 51.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 50.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 49.2
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 48.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 47.3
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 46.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 43.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 43.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 42.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 42.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 41.9
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 41.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 41.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 41.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 41.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 41.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 40.9
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 40.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 40.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 40.6
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 39.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 38.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 38.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 38.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 38.1
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 37.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 36.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 36.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 35.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 35.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 35.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 35.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 35.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 35.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 35.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 34.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 34.7
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 34.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 34.3
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 34.0
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 34.0
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 33.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 33.4
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 32.8
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 32.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 32.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 32.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 32.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 32.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 32.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 31.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 31.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 30.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 30.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 30.5
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 29.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 28.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 28.4
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 28.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 28.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 27.9
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 27.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 27.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 27.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 27.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 26.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 26.5
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 25.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 25.5
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 25.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 25.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 24.2
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 23.9
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 23.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 23.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 23.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 23.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 23.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 22.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 22.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 22.6
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 22.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 21.8
GTEX-QCQG-1226-SM-48U23 50-59 years, female 21.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 21.7
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 21.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 21.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 21.4
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 21.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 21.3
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 20.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 20.6
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 20.4
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 20.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 20.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 20.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 19.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 19.9
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 19.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 19.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 19.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 19.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 19.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 19.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 19.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 18.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 18.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 18.5
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 17.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 17.8
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 17.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 17.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 17.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 16.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 16.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 16.3
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 16.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 16.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 16.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 15.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 15.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 15.1
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 15.1
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 15.1
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 15.0
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 14.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 14.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 14.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 13.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 13.8
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 13.7
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 13.7
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 13.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 13.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 13.4
GTEX-14PKU-1326-SM-6871B 40-49 years, female 13.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 13.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 13.2
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 13.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 13.0
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 12.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 12.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 11.9
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 11.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 11.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 9.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 9.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 33.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 33.4
FF:10204-103F6 68 years, female 33.4

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