AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:5.6 nTPM
HPA:5.6 nTPM
GTEx:3.5 nTPM
FANTOM5:15.8 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:2.9 nTPM
Allen mouse:0.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 5.6
Sample id Sample description nTPM
Amygdala
nTPM: 5.6
2695 Female, age 67, right hemisphere 6.4
2514 Male, age 75, right hemisphere 6.1
1987 Female, age 91, left hemisphere 5.8
2517 Female, age 94, left hemisphere 5.1
2814 Male, age 76, right hemisphere 4.6
Basal amygdala
nTPM: 5.0
2827 Female, age 67, right hemisphere 6.2
2110 Male, age 80, left hemisphere 5.4
1955 Male, age 76, both hemispheres 4.9
2609 Male, age 75, right hemisphere 4.9
2243 Female, age 91, right hemisphere 4.7
2685 Female, age 94, left hemisphere 4.0
Central amygdala
nTPM: 4.9
2826 Female, age 94, left hemisphere 5.6
2515 Male, age 75, right hemisphere 5.1
2239 Male, age 80, left hemisphere 4.7
1905 Male, age 76, both hemispheres 4.5
2701 Female, age 91, right hemisphere 4.4
Corticomedial amygdala
nTPM: 5.0
2428 Male, age 75, right hemisphere 5.4
2242 Female, age 91, right hemisphere 5.3
2535 Female, age 67, right hemisphere 5.3
2240 Male, age 76, both hemispheres 5.1
2429 Female, age 94, left hemisphere 4.6
2829 Male, age 80, left hemisphere 4.6
Lateral amygdala
nTPM: 5.6
2830 Female, age 67, right hemisphere 8.0
2256 Male, age 80, left hemisphere 5.9
2516 Male, age 75, right hemisphere 5.2
2534 Female, age 94, left hemisphere 5.2
2255 Female, age 91, right hemisphere 4.7
1883 Male, age 76, both hemispheres 4.6
Stria terminalis, bed nucleus
nTPM: 4.0
2201 Male, age 74, unknown 4.3
1974 Female, age 91, both hemispheres 4.0
2486 Female, age 94, both hemispheres 3.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 3.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 3.5
Samples: 152

Max nTPM: 20.2
Min nTPM: 0.6
Std nTPM: 2.4
Median nTPM: 2.8
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 20.2
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 12.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 11.6
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 11.0
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 10.1
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 9.8
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 8.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 8.2
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 7.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 7.6
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 7.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 15.8
FF:10151-102I7 76 years, female 15.8

AMYGDALA - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Amygdala
nTPM: 5.6
Samples: 4

Max nTPM: 6.1
Min nTPM: 5.1
Sample A Female 5.1
Sample B Female 6.1
Sample C Male 5.8
Sample D Male 5.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 2.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 2.9
Samples: 4

Max nTPM: 3.5
Min nTPM: 2.5
Sample A Male 2.5
Sample B Male 2.7
Sample C Female 3.0
Sample D Female 3.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.8
68911030 Antisense, RP_050203_02_G10, Mouse strain C57BL/6J (56 days, male) 1.1
71063735 Antisense, RP_050725_03_C04, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.